RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 DFFAO00273 331 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 OAS1P00973 400 aaKnown RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 RCVRNP35243 200 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 GRIA2P42262 883 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 CPA2P48052 419 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 TAF6P49848 677 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP11-206ENST00000469080 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 SKA1Q96BD8 255 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 COQ6Q9Y2Z9 468 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 PAPSS1O43252 624 aaPredicted RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 STRNO43815 780 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 CYP2F1P24903 491 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 GPD2P43304 727 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 FLT3LGP49771 235 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 SLC26A2P50443 739 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 TKTL1P51854 596 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 RILPQ96NA2 401 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 TBCBQ99426 244 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 ST3GAL5Q9UNP4 418 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 CDH16O75309 829 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 BEST1O76090 585 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 FGFR1P11362 822 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ATP5DP30049 168 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 OR1G1P47890 313 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 RALGDSQ12967 914 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 NR1D2Q14995 579 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 SOWAHAQ2M3V2 549 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ZNF792Q3KQV3 632 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ZCCHC23Q6ZST2 131 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ARFGAP1Q8N6T3 406 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 CCDC185Q8N715 623 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 STARD8Q92502 1023 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 CCDC28BQ9BUN5 200 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 IPPQ9Y573 584 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 TRIP12Q14669 1992 aaPredicted RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 TRIP11Q15643 1979 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 AGTP01019 485 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 OCM2P0CE71 109 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 OCMP0CE72 109 aaPredicted RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 CCT8P50990 548 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 MPP2Q14168 576 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 VASH1Q7L8A9 365 aaPredicted RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 MIB1Q86YT6 1006 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 EBF3Q9H4W6 596 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 DDX56Q9NY93 547 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 NDUFA13Q9P0J0 144 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ANGPTL2Q9UKU9 493 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 UGT1A9O60656 530 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 TMEM63AO94886 807 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 ADRA1DP25100 572 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 CLCNKBP51801 687 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 IL9RQ01113 521 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 PTK7Q13308 1070 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 TFDP2Q14188 446 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 PCSK7Q16549 785 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 WDR45BQ5MNZ6 344 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 SPOUT1Q5T280 376 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 TRMT10CQ7L0Y3 403 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 INPP5DQ92835 1189 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 ULBP1Q9BZM6 244 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 VPS11Q9H270 941 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 MRPL46Q9H2W6 279 aaKnown RBP12.63□□□□□ -0.39
USP11-206ENST00000469080 ASB7Q9H672 318 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 UGT1A7Q9HAW7 530 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 UGT1A10Q9HAW8 530 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 UGT1A8Q9HAW9 530 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 GABRQQ9UN88 632 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 STYXL1Q9Y6J8 313 aa12.63□□□□□ -0.39
USP11-206ENST00000469080 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 SOAT2O75908 522 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms