RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 LPPQ93052 612 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 APBA2Q99767 749 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 TMEM30AQ9NV96 361 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 CAPN14A8MX76 684 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 HHLA1C9JL84 531 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 MTSS1O43312 755 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 ENTPD5O75356 428 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 MX2P20592 715 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 AFF1P51825 1210 aaKnown RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 ZNF135P52742 658 aaPredicted RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 OLIG2Q13516 323 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 SMAD1Q15797 465 aaKnown RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 INSCQ1MX18 579 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 GRTP1Q5TC63 336 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 ZNF669Q96BR6 464 aaPredicted RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 HDAC11Q96DB2 347 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 ZNF570Q96NI8 536 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 MYCBPQ99417 103 aaPredicted RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 EPAS1Q99814 870 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 SIKE1Q9BRV8 207 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 COLEC11Q9BWP8 271 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 GBA3Q9H227 469 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 MIOSQ9NXC5 875 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 TAS2R1Q9NYW7 299 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 BFARQ9NZS9 450 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 ZNF638Q14966 1978 aaKnown RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 ERI2A8K979 691 aaKnown RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 ZBTB24O43167 697 aaPredicted RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 FGF3P11487 239 aaPredicted RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 PCSK1P29120 753 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 BHLHA9Q7RTU4 235 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 RSPH3Q86UC2 560 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 TEX9Q8N6V9 391 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
NUP50-203ENST00000407019 ANKRD27Q96NW4 1050 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 FCRL3Q96P31 734 aaPredicted RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 MMADHCQ9H3L0 296 aaPredicted RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 CHST12Q9NRB3 414 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 ADAM28Q9UKQ2 775 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 MYADML2A6NDP7 307 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 ARL5CA6NH57 179 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 CASTOR2A6NHX0 329 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 USP12O75317 370 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 PROCP04070 461 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 AKR1A1P14550 325 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 TYK2P29597 1187 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 RPL9P32969 192 aaKnown RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 SERPINB6P35237 376 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 SCNN1GP51170 649 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 GALNT2Q10471 571 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 PCLAFQ15004 111 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 TBCCQ15814 346 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 ITPRIPL1Q6GPH6 555 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 WDR75Q8IWA0 830 aaKnown RBP17.24■□□□□ 0.35
NUP50-203ENST00000407019 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 EDEM1Q92611 657 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 RILPQ96NA2 401 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 WDCPQ9H6R7 721 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 DCLRE1BQ9H816 532 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 GIT1Q9Y2X7 761 aa17.24■□□□□ 0.35
NUP50-203ENST00000407019 DOCK3Q8IZD9 2030 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 KPNA6O60684 536 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 USP1O94782 785 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 ENO1P06733 434 aaKnown RBP17.23■□□□□ 0.35
NUP50-203ENST00000407019 CTSHP09668 335 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 KCNA4P22459 653 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 SLC1A6P48664 564 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 CXCR3P49682 368 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 CLNS1AP54105 237 aaKnown RBP17.23■□□□□ 0.35
NUP50-203ENST00000407019 FRG1Q14331 258 aaKnown RBP17.23■□□□□ 0.35
NUP50-203ENST00000407019 TEDDM1Q5T9Z0 273 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 KCTD11Q693B1 232 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 TREML1Q86YW5 311 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 ARHGAP24Q8N264 748 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 IRGQQ8WZA9 623 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 RBBP8Q99708 897 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 MTG1Q9BT17 334 aaPredicted RBP17.23■□□□□ 0.35
NUP50-203ENST00000407019 RHOBTB2Q9BYZ6 727 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 TKTL2Q9H0I9 626 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 CSNK1G1Q9HCP0 422 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 SNX10Q9Y5X0 201 aa17.23■□□□□ 0.35
NUP50-203ENST00000407019 MYO18AQ92614 2054 aaKnown RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 H0Y3Z8 333 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 ITM2AO43736 263 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 LYPLA1O75608 230 aaPredicted RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 SERPINE1P05121 402 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 CD68P34810 354 aaPredicted RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 CPA2P48052 419 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 SERPINB8P50452 374 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms