RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ERCC2P18074 760 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 SERPINB6P35237 376 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 ATP5C1P36542 298 aaKnown RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 ATP5OP48047 213 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 KCNQ1P51787 676 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 PLTPP55058 493 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 SLC10A2Q12908 348 aaPredicted RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 ADAM15Q13444 863 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 SLMAPQ14BN4 828 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 RBBP5Q15291 538 aaKnown RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 TRIP13Q15645 432 aaPredicted RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 FAM153CQ494X1 144 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 HECTD3Q5T447 861 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 DARS2Q6PI48 645 aaKnown RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 DNAJB7Q7Z6W7 309 aaPredicted RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 CDKL3Q8IVW4 592 aaPredicted RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 LRRC45Q96CN5 670 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 CCSER2Q9H7U1 834 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 USP29Q9HBJ7 922 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 THEGQ9P2T0 379 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 MTRF1LQ9UGC7 380 aaKnown RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 FAM153AQ9UHL3 310 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 SLC12A6Q9UHW9 1150 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 NEU3Q9UQ49 428 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 NCAM2O15394 837 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 SASH3O75995 380 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 IFNB1P01574 187 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 EPCAMP16422 314 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 EPHB2P29323 1055 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 GDF10P55107 478 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 MLLT6P55198 1093 aaPredicted RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 PABPC1LQ4VXU2 614 aaKnown RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 MICALCLQ6ZW33 695 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 ATP6V0D2Q8N8Y2 350 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 GLIS1Q8NBF1 620 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 QKIQ96PU8 341 aaKnown RBP eCLIP12.41□□□□□ -0.42
USF1-203ENST00000368021 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 EBAG9O00559 213 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 MFSD11O43934 449 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 GLUD1P00367 558 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 BIRC2Q13490 618 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 PDK1Q15118 436 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 P3H1Q32P28 736 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 ARTNQ5T4W7 220 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 C4orf22Q6V702 233 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 B4GALNT4Q76KP1 1039 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 PCGF5Q86SE9 256 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 TFB1MQ8WVM0 346 aaKnown RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 GDAP1L1Q96MZ0 367 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 SIK2Q9H0K1 926 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 CATSPERBQ9H7T0 1116 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 CLEC1BQ9P126 229 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 HS3ST4Q9Y661 456 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
USF1-203ENST00000368021 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
USF1-203ENST00000368021 CLUHO75153 1309 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 OAS1P00973 400 aaKnown RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 LRG1P02750 347 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 ZSCAN5DPP0CG00 497 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 VPS41P49754 854 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 ITGA8P53708 1063 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 COG7P83436 770 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 GPS1Q13098 491 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 MORF4L2Q15014 288 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 SPDYCQ5MJ68 293 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 PIK3R6Q5UE93 754 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 HIBCHQ6NVY1 386 aaPredicted RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 TMC3Q7Z5M5 1100 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 LZTR1Q8N653 840 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 KREMEN2Q8NCW0 462 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 FERMT1Q9BQL6 677 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 FOXP3Q9BZS1 431 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 ADAM7Q9H2U9 754 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 C10orf88Q9H8K7 445 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 ANAPC5Q9UJX4 755 aa12.4□□□□□ -0.42
USF1-203ENST00000368021 TPX2Q9ULW0 747 aaKnown RBP12.4□□□□□ -0.42
USF1-203ENST00000368021 MFHAS1Q9Y4C4 1052 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms