RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 NOMO3P69849 1222 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 AUHQ13825 339 aaKnown RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ARID5BQ14865 1188 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 HNRNPA1L2Q32P51 320 aaKnown RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 RAB6CQ53S08 254 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 C9orf64Q5T6V5 341 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 CCAR2Q8N163 923 aaKnown RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ATP6V0D2Q8N8Y2 350 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 CADM4Q8NFZ8 388 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ORAI3Q9BRQ5 295 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 RAB6CQ9H0N0 254 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 C6orf106Q9H6K1 298 aaPredicted RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ARHGEF38Q9NXL2 777 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 SERGEFQ9UGK8 458 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 TMEM59LQ9UK28 342 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 WASF3Q9UPY6 502 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 OR51B4Q9Y5P0 310 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ITIH6Q6UXX5 1313 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ZZEF1O43149 2961 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 LRRC10BA6NIK2 292 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 M0QYT0 321 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 NDUFS2O75306 463 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PAGE1O75459 146 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CFIP05156 583 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CXCR3P49682 368 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PLK1P53350 603 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 COPB1P53618 953 aaKnown RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 FMO1Q01740 532 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 ARID5AQ03989 594 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 SEMA3BQ13214 749 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 NME3Q13232 169 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CDH18Q13634 790 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 DCAF12L1Q5VU92 463 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PSAPL1Q6NUJ1 521 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PIP4P1Q86T03 277 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 FAM124AQ86V42 546 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 TMEM35BQ8NCS4 154 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CEP76Q8TAP6 659 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CPA5Q8WXQ8 436 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PTPRN2Q92932 1015 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 C18orf8Q96DM3 657 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PGAP3Q96FM1 320 aaPredicted RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 RPL10LQ96L21 214 aaKnown RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 NOX5Q96PH1 765 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 GBP4Q96PP9 640 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 PCDHB18PQ96TA0 734 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 FAM129BQ96TA1 746 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 TBCBQ99426 244 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 NUP58Q9BVL2 599 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 NUSAP1Q9BXS6 441 aaKnown RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 KIAA1522Q9P206 1035 aaPredicted RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 LIMA1Q9UHB6 759 aaKnown RBP17.6■□□□□ 0.41
BRCC3-202ENST00000340647 ANGPTL2Q9UKU9 493 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CABIN1Q9Y6J0 2220 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 CEP295Q9C0D2 2601 aa17.6■□□□□ 0.41
BRCC3-202ENST00000340647 F5H5T6 163 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 ARHGAP33O14559 1287 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 CNTN5O94779 1100 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 GFPT2O94808 682 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 CYP1A1P04798 512 aaPredicted RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 VAV1P15498 845 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 PDGFRAP16234 1089 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 OXTRP30559 389 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 DPP6P42658 865 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 RNASE9P60153 205 aaKnown RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 POLR2FP61218 127 aaKnown RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 E2F5Q15329 346 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 UAP1L1Q3KQV9 507 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 SH3PXD2AQ5TCZ1 1133 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 ZDHHC17Q8IUH5 632 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 DHX40Q8IX18 779 aaKnown RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 ZNF557Q8N988 423 aaPredicted RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 KDM1BQ8NB78 822 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 FAM207AQ9NSI2 230 aaPredicted RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 SUN2Q9UH99 717 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 RALYQ9UKM9 306 aaKnown RBP17.59■□□□□ 0.41
BRCC3-202ENST00000340647 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
BRCC3-202ENST00000340647 H0Y626 953 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 ASLP04424 464 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 SRPRAP08240 638 aaKnown RBP17.58■□□□□ 0.4
BRCC3-202ENST00000340647 CD59P13987 128 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
BRCC3-202ENST00000340647 SCNN1AP37088 669 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 SHC2P98077 582 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 PTP4A2Q12974 167 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 ALFQ53S48 1182 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 DAB2IPQ5VWQ8 1189 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 NAA35Q5VZE5 725 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 ERICH1Q86X53 443 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 RGL4Q8IZJ4 473 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 FRS2Q8WU20 508 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 FOXJ1Q92949 421 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 NLRC4Q9NPP4 1024 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.58■□□□□ 0.4
BRCC3-202ENST00000340647 ZNF212Q9UDV6 495 aa17.58■□□□□ 0.4
BRCC3-202ENST00000340647 AKAP13Q12802 2813 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms