RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FASTKD3Q14CZ7 662 aaKnown RBP10.56□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF829Q3KNS6 432 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-201ENST00000322535 UBE2UQ5VVX9 321 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 SNX32Q86XE0 403 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 SLC13A5Q86YT5 568 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-201ENST00000322535 FAM9CQ8IZT9 166 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 C2orf69Q8N8R5 385 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 TSPAN14Q8NG11 270 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 CDC26Q8NHZ8 85 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
SF3B2-201ENST00000322535 BCAP29Q9UHQ4 241 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 CPA4Q9UI42 421 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 CORINQ9Y5Q5 1042 aa10.56□□□□□ -0.72
SF3B2-201ENST00000322535 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 CXCL11O14625 94 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 HOXC11O43248 304 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 LRRN2O75325 713 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ALX3O95076 343 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ITIH2P19823 946 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PTPN9P43378 593 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 CCNIQ14094 377 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 BORAQ6PGQ7 559 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 CYP2U1Q7Z449 544 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 HPS6Q86YV9 775 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GALNT13Q8IUC8 556 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ALLCQ8N6M5 410 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 DDI1Q8WTU0 396 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 HSPH1Q92598 858 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 CCDC138Q96M89 665 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 SLC29A1Q99808 456 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ZSWIM1Q9BR11 485 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 HEMGNQ9BXL5 484 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GPAMQ9HCL2 828 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GCNT4Q9P109 453 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PCDHGB3Q9Y5G1 929 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 KIAA1217Q5T5P2 1943 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 LINC01387J3KSC0 135 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 RGS13O14921 159 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 NR2F2P24468 414 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 HOXA7P31268 230 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GNA12Q03113 381 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PDIA2Q13087 525 aaKnown RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF568Q3ZCX4 644 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 SPDYAQ5MJ70 313 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PERM1Q5SV97 790 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GSTA5Q7RTV2 222 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 TAB3Q8N5C8 712 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 KCNH4Q9UQ05 1017 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
SF3B2-201ENST00000322535 ACTL7BQ9Y614 415 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 DOCK3Q8IZD9 2030 aa10.55□□□□□ -0.72
SF3B2-201ENST00000322535 LOC100653049A0A140TA62 436 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 E5RJQ4 531 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 PSMD12O00232 456 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 PRPF4O43172 522 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■□□□ 12.3
SF3B2-201ENST00000322535 BANF1O75531 89 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 KRT34O76011 436 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ARIH2O95376 493 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CD48P09326 243 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CCDC130P13994 396 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CDK9P50750 372 aaKnown RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CETN1Q12798 172 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 BNIP3Q12983 259 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 RGS21Q2M5E4 152 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 DNAL1Q4LDG9 190 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 GPR141Q7Z602 305 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ARID3BQ8IVW6 561 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 MARVELD2Q8N4S9 558 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 DACT3Q96B18 629 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 RANBP9Q96S59 729 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SP140LQ9H930 580 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TCF7L2Q9NQB0 619 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ARMC1Q9NVT9 282 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 WHRNQ9P202 907 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 DNAJB4Q9UDY4 337 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TAGLN3Q9UI15 199 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SLC8A2Q9UPR5 921 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ANGPTL3Q9Y5C1 460 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ARHGEF35A5YM69 484 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TAF4O00268 1085 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 GIPC1O14908 333 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ZMPSTE24O75844 475 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 PRLP01236 227 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 PROCP04070 461 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 DLDP09622 509 aaKnown RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 HSPA6P17066 643 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 GCAP28676 217 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 KRT6CP48668 564 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms