RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 TNFSF13BQ9Y275 285 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TCRBV9S1A1TA0A576 114 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 APOL1O14791 398 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 SCGB1D2O95969 90 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 HMGCRP04035 888 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 C6orf222P0C671 652 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 IQCF3P0C7M6 154 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 BGNP21810 368 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ADORA2BP29275 332 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 EPHB2P29323 1055 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 ARFIP2P53365 341 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 RBP5P82980 135 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CTBSQ01459 385 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TNFAIP2Q03169 654 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 MBTD1Q05BQ5 628 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GRM1Q13255 1194 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 R3HDM1Q15032 1099 aaKnown RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 CCDC6Q16204 474 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 MAP1SQ66K74 1059 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 CDCA2Q69YH5 1023 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 HFE2Q6ZVN8 426 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 GET4Q7L5D6 327 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 NETO2Q8NC67 525 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 DENND1AQ8TEH3 1009 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 FAM172AQ8WUF8 416 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 AFG1LQ8WV93 481 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 FAM149B1Q96BN6 582 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 PEBP4Q96S96 227 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 CLEC4MQ9H2X3 399 aaPredicted RBP5.54□□□□□ -1.52
VAPA-203ENST00000577539 EURLQ9NYK6 297 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 HEY2Q9UBP5 337 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 TAGLN3Q9UI15 199 aa5.54□□□□□ -1.52
VAPA-203ENST00000577539 C2orf71A6NGG8 1288 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 HAUS5O94927 633 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ARAFP10398 606 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 KITP10721 976 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ARF4P18085 180 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 CCND1P24385 295 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 EDNRBP24530 442 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 STIP1P31948 543 aaKnown RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 CDH5P33151 784 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 GPD2P43304 727 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 CYP4F3Q08477 520 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 RFWD2Q8NHY2 731 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 MCUR1Q96AQ8 359 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 FAM167BQ9BTA0 163 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 B3GNT5Q9BYG0 378 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 KLC2Q9H0B6 622 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ARHGEF3Q9NR81 526 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.53□□□□□ -1.52
VAPA-203ENST00000577539 MARCOQ9UEW3 520 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 BARX2Q9UMQ3 279 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 C3orf70A6NLC5 250 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 I3L4J1 428 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ABLIM1O14639 778 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 TYROBPO43914 113 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ATP5HO75947 161 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 SLC25A27O95847 323 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 LCP1P13796 627 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 CPA2P48052 419 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 ZNF143P52747 638 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 TMPRSS15P98073 1019 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 KIZQ2M2Z5 673 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 MDH1BQ5I0G3 518 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 LGSNQ5TDP6 509 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 YOD1Q5VVQ6 348 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 LRFN4Q6PJG9 635 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 RFX8Q6ZV50 586 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 PLPPR4Q7Z2D5 763 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 AGGF1Q8N302 714 aaeCLIP5.53□□□□□ -1.52
VAPA-203ENST00000577539 CMASQ8NFW8 434 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 FNIP1Q8TF40 1166 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 RNF157Q96PX1 679 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 NUDCD1Q96RS6 583 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 SERINC2Q96SA4 455 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 PPCSQ9HAB8 311 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 SEPT10Q9P0V9 454 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 MCM8Q9UJA3 840 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 LZTS1Q9Y250 596 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 HES2Q9Y543 173 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 NR2E3Q9Y5X4 410 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 CCDC85CA6NKD9 419 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 A8MXQ7 604 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 SOX1O00570 391 aaPredicted RBP5.53□□□□□ -1.52
VAPA-203ENST00000577539 TNFRSF10CO14798 259 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 TIMM44O43615 452 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 KRT37O76014 449 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 CYP2C8P10632 490 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 MCF2P10911 925 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 FGFR1P11362 822 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 PTPN7P35236 360 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 PCK1P35558 622 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 RIPK1Q13546 671 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 RCN2Q14257 317 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 GAS6Q14393 721 aa5.53□□□□□ -1.52
VAPA-203ENST00000577539 TAF11Q15544 211 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms