RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	MDGA2	Q7Z553	956 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	RHPN2	Q8IUC4	686 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	GALNT4	Q8N4A0	578 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	PTGR2	Q8N8N7	351 aa	Predicted RBP	5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	USP13	Q92995	863 aa	Predicted RBP	5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	HIC2	Q96JB3	615 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	CCDC17	Q96LX7	622 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	REEP2	Q9BRK0	252 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	EFHD1	Q9BUP0	239 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	PHF7	Q9BWX1	381 aa	Predicted RBP	5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	RNF26	Q9BY78	433 aa	Predicted RBP	5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	TMPRSS5	Q9H3S3	457 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	TFCP2L1	Q9NZI6	479 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	HDAC6	Q9UBN7	1215 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	ZNHIT2	Q9UHR6	403 aa		5.09	□□□□□ -1.59
CTNNA1-222	ENST00000520400	ERCC6	Q03468	1493 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PRRT4	C9JH25	899 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	BTBD19	C9JJ37	291 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LATS1	O95835	1130 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ALDOA	P04075	364 aa	Known RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ALDOC	P09972	364 aa	Known RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ARSA	P15289	507 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	BMP5	P22003	454 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PAPOLA	P51003	745 aa	Known RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TGFB2	P61812	414 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ZBTB16	Q05516	673 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CHRND	Q07001	517 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ERCC6L	Q2NKX8	1250 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TBRG1	Q3YBR2	411 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MAP3K21	Q5TCX8	1036 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MTFR2	Q6P444	385 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	C8orf58	Q8NAV2	365 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	C2CD4C	Q8TF44	421 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NTN5	Q8WTR8	489 aa	Predicted RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HTRA1	Q92743	480 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RBM17	Q96I25	401 aa	Known RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PIGS	Q96S52	555 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FRMD8	Q9BZ67	464 aa	Predicted RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NUAK2	Q9H093	628 aa		5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RRP7A	Q9Y3A4	280 aa	Known RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.08	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KLK10	O43240	276 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	DHX16	O60231	1041 aa	Known RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NUDT3	O95989	172 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CPA1	P15085	419 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HOXA7	P31268	230 aa	Predicted RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LIFR	P42702	1097 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	UBE3A	Q05086	875 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MMS22L	Q6ZRQ5	1243 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ESX1	Q8N693	406 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FAM110D	Q8TAY7	271 aa	Predicted RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	WIPF2	Q8TF74	440 aa	Predicted RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	IP6K1	Q92551	441 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	P2RY11	Q96G91	374 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ASB2	Q96Q27	587 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FYTTD1	Q96QD9	318 aa	Known RBP	5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SH2D3A	Q9BRG2	576 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MRI	Q9BWK5	157 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CTDSP1	Q9GZU7	261 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TXNRD2	Q9NNW7	524 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PDGFC	Q9NRA1	345 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FBXO4	Q9UKT5	387 aa		5.07	□□□□□ -1.6
CTNNA1-222	ENST00000520400	C3orf70	A6NLC5	250 aa	Predicted RBP	5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HOXC11	O43248	304 aa	Predicted RBP	5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ST6GAL1	P15907	406 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PNPLA4	P41247	253 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NR1H2	P55055	460 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	POU5F1B	Q06416	359 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SEMA3A	Q14563	771 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CTXN3	Q4LDR2	81 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ARL13A	Q5H913	290 aa	Predicted RBP	5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SH2D4B	Q5SQS7	431 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SLC9C2	Q5TAH2	1124 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SCN4B	Q8IWT1	228 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FSIP1	Q8NA03	581 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	STAM	Q92783	540 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KCNJ9	Q92806	393 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MAP4K1	Q92918	833 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MASTL	Q96GX5	879 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TBATA	Q96M53	351 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	C5orf34	Q96MH7	638 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FCRL5	Q96RD9	977 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CLSTN3	Q9BQT9	956 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ABHD14A	Q9BUJ0	271 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HTATIP2	Q9BUP3	242 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PRDM16	Q9HAZ2	1276 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	THAP1	Q9NVV9	213 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KL	Q9UEF7	1012 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	BAG5	Q9UL15	447 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HSF4	Q9ULV5	492 aa		5.06	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SLC22A23	A1A5C7	686 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LINC01548	A6NM66	108 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	DSCR3	O14972	297 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CHRM5	P08912	532 aa	Predicted RBP	5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ATP1A3	P13637	1013 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CD72	P21854	359 aa		5.05	□□□□□ -1.6

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