RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 GPD1P21695 349 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PEX2P28328 305 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TPD52P55327 224 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 SUMO3P55854 103 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 COX10Q12887 443 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CTBP1Q13363 440 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 SMC1AQ14683 1233 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARHGEF6Q15052 776 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 BOLA3Q53S33 107 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC158Q5M9N0 1113 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CEP85LQ5SZL2 805 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMEM63BQ5T3F8 832 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 THOC7Q6I9Y2 204 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CAPRIN2Q6IMN6 1127 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ANKRD16Q6P6B7 361 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PEG10Q86TG7 708 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CLASRPQ8N2M8 674 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPC24Q8NBT2 197 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 MSANTD4Q8NCY6 345 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 FAM156AQ8NDB6 213 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TRIM58Q8NG06 486 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC110Q8TBZ0 833 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 MAML1Q92585 1016 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 GTF3C6Q969F1 213 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 LRRC59Q96AG4 307 aaKnown RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 VOPP1Q96AW1 172 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 COG3Q96JB2 828 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ANKRD27Q96NW4 1050 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 NEK1Q96PY6 1258 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 HAPLN3Q96S86 360 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TIMP4Q99727 224 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 MESP1Q9BRJ9 268 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 OSBPL10Q9BXB5 764 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 BTBD1Q9H0C5 482 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 SYNCQ9H7C4 482 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARHGEF3Q9NR81 526 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 FOXJ2Q9P0K8 574 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CORO1CQ9ULV4 474 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMCO1Q9UM00 188 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 DIP2AQ14689 1571 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 CEP170BQ9Y4F5 1589 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ACEP12821 1306 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ADGRA2Q96PE1 1338 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CEP152O94986 1710 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 KAT6AQ92794 2004 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 C3P01024 1663 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 POLR3AO14802 1390 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MSH6P52701 1360 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 LOC102723971A0A1B0GUV8 181 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC162PA2VCL2 907 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 EME2A4GXA9 379 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMEM221A6NGB7 291 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 QSOX1O00391 747 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 EBAG9O00559 213 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 HNRNPCP07910 306 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC166P0CW27 439 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 NR2F6P10588 404 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MYF5P13349 255 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 RHCEP18577 417 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 WT1P19544 449 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CD38P28907 300 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 S100A5P33763 92 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CA8P35219 290 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MTHFSP49914 203 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TOB1P50616 345 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 DGKEP52429 567 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MAPK10P53779 464 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TUBB4BP68371 445 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 PHEXP78562 749 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 RHDQ02161 417 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MECOMQ03112 1051 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 GRM3Q14832 879 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPDYCQ5MJ68 293 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 DENND2CQ68D51 928 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 RGS7BPQ6MZT1 257 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MZT2AQ6P582 158 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 APOA5Q6Q788 366 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 KRT28Q7Z3Y7 464 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 KRT77Q7Z794 578 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ADGRG3Q86Y34 549 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 GPR150Q8NGU9 434 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 OSCP1Q8WVF1 389 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZKSCAN4Q969J2 545 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF653Q96CK0 615 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CDHR1Q96JP9 859 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTC14Q96N46 770 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 NEUROD6Q96NK8 337 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 NT5C1BQ96P26 610 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 STRBPQ96SI9 672 aaKnown RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TSC22D3Q99576 134 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 EIF2AQ9BY44 585 aaKnown RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TNMDQ9H2S6 317 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZHX3Q9H4I2 956 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARNT2Q9HBZ2 717 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMEM165Q9HC07 324 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF304Q9HCX3 659 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 PNPLA8Q9NP80 782 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms