RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 COLEC12Q5KU26 742 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 FAM26FQ5R3K3 315 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 MPP7Q5T2T1 576 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 CDCP2Q5VXM1 449 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 KANSL1Q7Z3B3 1105 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 KIAA0907Q7Z7F0 614 aaPredicted RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 SCD5Q86SK9 330 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 C12orf56Q8IXR9 622 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 KDM1BQ8NB78 822 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 OR4C6Q8NH72 309 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 OR14C36Q8NHC7 312 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 GOLGA5Q8TBA6 731 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 ZNF507Q8TCN5 953 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 RNF139Q8WU17 664 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 GRAMD1AQ96CP6 724 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 TMA16Q96EY4 203 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 DUSP16Q9BY84 665 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 NEUROG2Q9H2A3 272 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 KDM4CQ9H3R0 1056 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 EBF2Q9HAK2 575 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 USP29Q9HBJ7 922 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 ASCL3Q9NQ33 180 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 TFIP11Q9UBB9 837 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 TJP2Q9UDY2 1190 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 SERGEFQ9UGK8 458 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 SEPT3Q9UH03 358 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 HBS1LQ9Y450 684 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 SRPRBQ9Y5M8 271 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 ITPR2Q14571 2701 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 DOCK9Q9BZ29 2069 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 NBPF19A0A087WUL8 3843 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3DA0A087WVF3 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3IA0A087WXS9 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3EA0A087X179 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3KA0A087X1G2 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 EDDM13A0A1B0GTR0 161 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3FA6NER0 549 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 LRRIQ3A6PVS8 624 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3LB9A6J9 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 IRAK2O43187 625 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TGFB1I1O43294 461 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 LATO43561 262 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 LZTS3O60299 673 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 OPA1O60313 960 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 MOCS3O95396 460 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 SRPRAP08240 638 aaKnown RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3HP0C7X1 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 CKMT1AP12532 417 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 C5AR1P21730 350 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 SLC8A1P32418 973 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 MLLT3P42568 568 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 ASPAP45381 313 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 PSMD8P48556 350 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 CASP4P49662 377 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 INHBCP55103 352 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 EHHADHQ08426 723 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 INCA1Q0VD86 236 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 KCNJ12Q14500 433 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 ARID5BQ14865 1188 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TRIP4Q15650 581 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 ZSCAN23Q3MJ62 389 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 SETMARQ53H47 684 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 RNF219Q5W0B1 726 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3GQ6DHY5 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3CQ6IPX1 549 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 EPM2AIP1Q7L775 607 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 TMC6Q7Z403 805 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 SPATS2Q86XZ4 545 aaKnown RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 MMAAQ8IVH4 418 aaKnown RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 MFN1Q8IWA4 741 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 NELFCDQ8IXH7 590 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 TBC1D3Q8IZP1 549 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 ARL14Q8N4G2 192 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 CCDC150Q8NCX0 1101 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 MAPK15Q8TD08 544 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDPN-205ENST00000487038 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 CUEDC2Q9H467 287 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 STOML2Q9UJZ1 356 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 FBXO2Q9UK22 296 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 SATB2Q9UPW6 733 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 SMC3Q9UQE7 1217 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 CEP83Q9Y592 693 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.95□□□□□ -1.14
PDPN-205ENST00000487038 PCDHGA8Q9Y5G5 932 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 ITIH6Q6UXX5 1313 aa7.95□□□□□ -1.14
PDPN-205ENST00000487038 A0A1B0GVM2 712 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 NEMP2A6NFY4 417 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 PRAMEF26H0Y7S4 382 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 WNT9AO14904 365 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 FFAR2O15552 330 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 SLC7A4O43246 635 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 TBL1XO60907 577 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
PDPN-205ENST00000487038 VNN1O95497 513 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 ASS1P00966 412 aaKnown RBP7.94□□□□□ -1.14
PDPN-205ENST00000487038 IL1BP01584 269 aa7.94□□□□□ -1.14
PDPN-205ENST00000487038 C4BPAP04003 597 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms