RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 GALK1P51570 392 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ATXN1P54253 815 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CDH4P55283 916 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ST8SIA6P61647 398 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 RPS24P62847 133 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 NRG1Q02297 640 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SULT2A1Q06520 285 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 EIF4EBP2Q13542 120 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 KRT81Q14533 505 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 HSF5Q4G112 596 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FAM133BQ5BKY9 247 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PPP6R3Q5H9R7 873 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TMEM196Q5HYL7 178 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SH3PXD2AQ5TCZ1 1133 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FYB2Q5VWT5 728 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TRNP1Q6NT89 227 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FBXL22Q6P050 247 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 BNIPLQ7Z465 357 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SETD3Q86TU7 594 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF354CQ86Y25 554 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 DNAAF5Q86Y56 855 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TERB1Q8NA31 727 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FIBINQ8TAL6 211 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 UBE2Q2Q8WVN8 375 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TEKT4Q8WW24 435 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ARHGEF26Q96DR7 871 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ALS2CR12Q96Q35 445 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PRRX2Q99811 253 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PACSIN1Q9BY11 444 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FOXQ1Q9C009 403 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CIPCQ9C0C6 399 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ZYG11BQ9C0D3 744 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 MUC3BQ9H195 1237 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 DHX35Q9H5Z1 703 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 EPHX3Q9H6B9 360 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 LMAN1LQ9HAT1 526 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PPARGC1AQ9UBK2 798 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PCSK1NQ9UHG2 260 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 XPO7Q9UIA9 1087 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 HPCAL4Q9UM19 191 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 NENFQ9UMX5 172 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PLA2G4CQ9UP65 541 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SLC27A6Q9Y2P4 619 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CKAP5Q14008 2032 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 ANKRD36A6QL64 1941 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CEP192Q8TEP8 1941 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SPAG17Q6Q759 2223 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 GOLGA6L7A0A1B0GV03 622 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 OTOL1A6NHN0 477 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 BTNL10A8MVZ5 291 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 EEF2KO00418 725 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 LRCH4O75427 683 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 LRIG2O94898 1065 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ASLP04424 464 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RHOCP08134 193 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 PABPC1P11940 636 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RHOQP17081 205 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 TARSP26639 723 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 EPHB2P29323 1055 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 SERPINB6P35237 376 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 OPRD1P41143 372 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 MAPKAPK2P49137 400 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 CCR3P51677 355 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 NUBP1P53384 320 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 HADHBP55084 474 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 GEMIN4P57678 1058 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 OGDHQ02218 1023 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 STARD3Q14849 445 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 PDK2Q15119 407 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 TCEAL1Q15170 157 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 EOGTQ5NDL2 527 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 OTUD1Q5VV17 481 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 NADSYN1Q6IA69 706 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RAD9BQ6WBX8 426 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF783Q6ZMS7 281 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 POLNQ7Z5Q5 900 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 TMEM139Q8IV31 216 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RHOT1Q8IXI2 618 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ETFBKMTQ8IXQ9 262 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 CFAP52Q8N1V2 620 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RNF10Q8N5U6 811 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 LZTR1Q8N653 840 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC185Q8N715 623 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF513Q8N8E2 541 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 KCTD6Q8NC69 237 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ACRBPQ8NEB7 543 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 KIAA1524Q8TCG1 905 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 HSPH1Q92598 858 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 CHFRQ96EP1 664 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 PRICKLE1Q96MT3 831 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 PRMT1Q99873 361 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 SNRNP25Q9BV90 132 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 C2orf49Q9BVC5 232 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 MAK16Q9BXY0 300 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 OSGEPQ9NPF4 335 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms