RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DLG3Q92796 817 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 MTMR9Q96QG7 549 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 MRPL42Q9Y6G3 142 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 FRMPD4Q14CM0 1322 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 ANKRD63C9JTQ0 380 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 CNOT3O75175 753 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 LPIN1Q14693 890 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 TRIP4Q15650 581 aaPredicted RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 EXOC3L1Q86VI1 746 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 KATNAL2Q8IYT4 538 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 GPRC5AQ8NFJ5 357 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 TRPC4APQ8TEL6 797 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 VPS33AQ96AX1 596 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 CLPBQ9H078 707 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 SLCO1B3Q9NPD5 702 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 HACL1Q9UJ83 578 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 CAMSAP1Q5T5Y3 1602 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 GUCA1CO95843 209 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 LDLRP01130 860 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 SLC2A4P14672 509 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 CDK7P50613 346 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 TP53BP2Q13625 1128 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ACAP1Q15027 740 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 PDK4Q16654 411 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 FAM98BQ52LJ0 330 aaKnown RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF470Q6ECI4 717 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 CDH24Q86UP0 819 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 TBCBQ99426 244 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 BDH2Q9BUT1 245 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 VTI1BQ9UEU0 232 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 MAGEB16A2A368 324 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 APOC4-APOC2K7ER74 178 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 APOC2P02655 101 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 HMGCRP04035 888 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ALOX15P16050 662 aaPredicted RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 CHKAP35790 457 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 DGUOKQ16854 277 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ATP13A4Q4VNC1 1196 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 POLNQ7Z5Q5 900 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 MID1IP1Q9NPA3 183 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 COMMD8Q9NX08 183 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 F5H5T6 163 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 LGR5O75473 907 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 MED26O95402 600 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 SLC11A2P49281 568 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 EFEMP1Q12805 493 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 DNAJC14Q6Y2X3 702 aaPredicted RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 NMRAL1Q9HBL8 299 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 TMCC3Q9ULS5 477 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 KATNA1O75449 491 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ZMPSTE24O75844 475 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 MICAL2O94851 1124 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ASS1P00966 412 aaKnown RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 UQCRBP14927 111 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 ARMC4Q5T2S8 1044 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 UTP15Q8TED0 518 aaKnown RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 CACNA2D2Q9NY47 1150 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 PCYOX1Q9UHG3 505 aa16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 REXO2Q9Y3B8 237 aaKnown RBP16.8■□□□□ 0.28
SH3RF1-201ENST00000284637 C2CD2LO14523 706 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 TSC22D2O75157 780 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 PIGNO95427 931 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 CCR1P32246 355 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF484Q5JVG2 852 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ADAM32Q8TC27 787 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 KRT84Q9NSB2 600 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 BANF1O75531 89 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 RRM2P31350 389 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 PGM5Q15124 567 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ERO1BQ86YB8 467 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 BHLHE22Q8NFJ8 381 aaPredicted RBP16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 PLEKHG4BQ96PX9 1271 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 CPNE1Q99829 537 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 DNAAF2Q9NVR5 837 aaKnown RBP16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 CHI3L1P36222 383 aaPredicted RBP16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 OSCP1Q8WVF1 389 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 FBXO32Q969P5 355 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 C6orf62Q9GZU0 229 aaPredicted RBP16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 GANQ9H2C0 597 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ACTR8Q9H981 624 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 NCAM2O15394 837 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ERVK-10P10266 1014 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms