RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CENPIQ92674 756 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 RTP4Q96DX8 246 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 OXNAD1Q96HP4 312 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 DENND2DQ9H6A0 471 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 KRT82Q9NSB4 513 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 MBLAC1A4D2B0 266 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 RRN3P2A6NIE6 340 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 RNF103O00237 685 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 PYGLP06737 847 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 ZNF865P0CJ78 1059 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 PTPN9P43378 593 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
DDX55-209ENST00000542286 GPR162Q16538 588 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 SPRYD7Q5W111 196 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 CLEC20AQ6ZU45 233 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 UNC93AQ86WB7 457 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 SLC7A14Q8TBB6 771 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 AZIN2Q96A70 460 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 FAM136AQ96C01 138 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 P2RY11Q96G91 374 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 MIPEPQ99797 713 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 PRDM12Q9H4Q4 367 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 CRTAC1Q9NQ79 661 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 UBP1Q9NZI7 540 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 SMIM35A0A1B0GVV1 85 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 F8W810 466 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 USP17L7P0C7H9 530 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 MYL2P10916 166 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 MATKP42679 507 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 CLCNKBP51801 687 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 TKTL1P51854 596 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 SLC18A1P54219 525 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 SESN3P58005 492 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 PPM1JQ5JR12 505 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 WASHC2DQ5SRD0 308 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 TTC39BQ5VTQ0 682 aaPredicted RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 FYB2Q5VWT5 728 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 ZNF467Q7Z7K2 595 aaPredicted RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 RNF139Q8WU17 664 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 INPP5DQ92835 1189 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 QKIQ96PU8 341 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX55-209ENST00000542286 EBNA1BP2Q99848 306 aaKnown RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 ULBP1Q9BZM6 244 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX55-209ENST00000542286 FZD10Q9ULW2 581 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 TM9SF1O15321 606 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 NVLO15381 856 aaKnown RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 LYPLA1O75608 230 aaPredicted RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 FYNP06241 537 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 BST1Q10588 318 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 CUL3Q13618 768 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 RASA2Q15283 850 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 CHI3L2Q15782 390 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 HSF5Q4G112 596 aaPredicted RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 IRGCQ6NXR0 463 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 ANKRD23Q86SG2 305 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 FBXO27Q8NI29 283 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 TFB1MQ8WVM0 346 aaKnown RBP15.2■□□□□ 0.02
DDX55-209ENST00000542286 MOCOSQ96EN8 888 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 FAM210AQ96ND0 272 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 PPP1R12CQ9BZL4 782 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 ZNF358Q9NW07 568 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 SCOCQ9UIL1 159 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 SH3BP1Q9Y3L3 701 aa15.2■□□□□ 0.02
DDX55-209ENST00000542286 GOLGA8TH3BQL2 631 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SNRPAP09012 282 aaKnown RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 DHRS4L1P0CG22 281 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SETSIPP0DME0 302 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ARL4AP40617 200 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ADAM17P78536 824 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 PRKD1Q15139 912 aaPredicted RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ARHGAP22Q7Z5H3 698 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 VPS11Q9H270 941 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 LRRC4Q9HBW1 653 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 NMRK1Q9NWW6 199 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SYBUQ9NX95 663 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ARFIP2P53365 341 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 TMPRSS15P98073 1019 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ZBTB16Q05516 673 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ARID3BQ8IVW6 561 aaPredicted RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 GSTCDQ8NEC7 633 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 PGBD4Q96DM1 585 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 DCLRE1BQ9H816 532 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 FETUBQ9UGM5 382 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 DERAQ9Y315 318 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SHROOM3Q8TF72 1996 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 GCATO75600 419 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms