RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CENPTQ96BT3 561 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 TIFAQ96CG3 184 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 NMD3Q96D46 503 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 VMP1Q96GC9 406 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 APIPQ96GX9 242 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 P2RX7Q99572 595 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CAPS2Q9BXY5 557 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DPH1Q9BZG8 443 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 UBXN6Q9BZV1 441 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 BRD8Q9H0E9 1235 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 GLOD4Q9HC38 313 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 PDRG1Q9NUG6 133 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 MAP3K20Q9NYL2 800 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 TBC1D7Q9P0N9 293 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 AFF4Q9UHB7 1163 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF148Q9UQR1 794 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 SSX2IPQ9Y2D8 614 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 NSD2O96028 1365 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 PTCH1Q13635 1447 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 LAMC1P11047 1609 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 MADDQ8WXG6 1647 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TPP1O14773 563 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIAA0355O15063 1070 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 POLR3GO15318 223 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CYTH3O43739 400 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 DIAPH2O60879 1101 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 MYBP10242 640 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZKSCAN1P17029 563 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TYRP1P17643 537 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 KLRC1P26715 233 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 OAS2P29728 719 aaKnown RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 PRKAR1BP31321 381 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARHGAP25P42331 645 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 MATR3P43243 847 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 FNTAP49354 379 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 PAPOLAP51003 745 aaKnown RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 PDE6CP51160 858 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 PRKAG1P54619 331 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 HSPA2P54652 639 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 NLRP5P59047 1200 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 LILRA4P59901 499 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TUBA4AP68366 448 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SIM1P81133 766 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 NAA25Q14CX7 972 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 LLGL1Q15334 1064 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TBCCQ15814 346 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CNGA2Q16280 664 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TXNRD1Q16881 649 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARHGAP40Q5TG30 622 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CPLX2Q6PUV4 134 aaKnown RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 MTHFD1LQ6UB35 978 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 KSR2Q6VAB6 950 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ATF7IPQ6VMQ6 1270 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 LUZP1Q86V48 1076 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 RAB11FIP4Q86YS3 637 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 YAF2Q8IY57 180 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CEP57L1Q8IYX8 460 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPARTQ8N0X7 666 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 NDUFAF2Q8N183 169 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 FAM109AQ8N4B1 249 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTC39CQ8N584 583 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 KCNH5Q8NCM2 988 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SIMC1Q8NDZ2 872 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 RASSF8Q8NHQ8 419 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TFAP2BQ92481 460 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 USP6NLQ92738 828 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPSB4Q96A44 273 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 GCC1Q96CN9 775 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPDL1Q96EA4 605 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 RBM41Q96IZ5 413 aaKnown RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 UROC1Q96N76 676 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 MS4A7Q9GZW8 240 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC68Q9H2F9 335 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SMOC2Q9H3U7 446 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SERHLQ9NQF3 203 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 SACM1LQ9NTJ5 587 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 IL20Q9NYY1 176 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 HDAC6Q9UBN7 1215 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CIDEBQ9UHD4 219 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 DDX20Q9UHI6 824 aaKnown RBP4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CFAP45Q9UL16 551 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 LZTS1Q9Y250 596 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 CARD8Q9Y2G2 431 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTLL3Q9Y4R7 772 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ENTPD2Q9Y5L3 495 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ADGRB1O14514 1584 aa4.99□□□□□ -1.61
HMGB3P13-201ENST00000511263 ANKARQ7Z5J8 1434 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 GOLGA6L7A0A1B0GV03 622 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 ENO4A6NNW6 628 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 H0YC42 278 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 MYO1FO00160 1098 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PSMD9O00233 223 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PROP1O75360 226 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 RASSF9O75901 435 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMCC1O94876 653 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 C1RP00736 705 aa4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PENKP01210 267 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P13-201ENST00000511263 PRKCBP05771 671 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms