RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ZFXP17010 805 aaPredicted RBP18.22■□□□□ 0.51
NUP54-205ENST00000507257 ZNF23P17027 643 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 FLOT2Q14254 428 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 RFTN1Q14699 578 aaPredicted RBP18.22■□□□□ 0.51
NUP54-205ENST00000507257 OLFML2BQ68BL8 750 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 STYK1Q6J9G0 422 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 BNC2Q6ZN30 1099 aaPredicted RBP18.22■□□□□ 0.51
NUP54-205ENST00000507257 PGAM4Q8N0Y7 254 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 ANKRD36BP1Q96IX9 119 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 FERMT1Q9BQL6 677 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 FAM124BQ9H5Z6 455 aaPredicted RBP18.22■□□□□ 0.51
NUP54-205ENST00000507257 ZNF302Q9NR11 478 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 SH3BP1Q9Y3L3 701 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
NUP54-205ENST00000507257 HEY1Q9Y5J3 304 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 RPS6KL1Q9Y6S9 549 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 CCDC160A6NGH7 325 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 GARSP41250 739 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 TARBP2Q15633 366 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 ZNF667Q5HYK9 610 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 VWA5B1Q5TIE3 1220 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 TRNP1Q6NT89 227 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 HACE1Q8IYU2 909 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 QKIQ96PU8 341 aaKnown RBP eCLIP18.21■□□□□ 0.51
NUP54-205ENST00000507257 LENG8Q96PV6 779 aaPredicted RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 PRPF18Q99633 342 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 ACO2Q99798 780 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 MRPL1Q9BYD6 325 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 SHCBP1LQ9BZQ2 653 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 RNF146Q9NTX7 359 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 DDX18Q9NVP1 670 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 TMEM216Q9P0N5 145 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 BTBD7Q9P203 1132 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 CILPO75339 1184 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 BCAS2O75934 225 aaPredicted RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 VDRP11473 427 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 PGAM1P18669 254 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 PIK3R1P27986 724 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 ALDH3B2P48448 385 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 CDK9P50750 372 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 SCNN1BP51168 640 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 TXNL4AP83876 142 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 LRRC8BQ6P9F7 803 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 DSELQ8IZU8 1212 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 SLC7A14Q8TBB6 771 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 AFG1LQ8WV93 481 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 SREK1Q8WXA9 508 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 CNBD2Q96M20 576 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 TRIM56Q9BRZ2 755 aaKnown RBP18.21■□□□□ 0.51
NUP54-205ENST00000507257 CYP3A43Q9HB55 503 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 TCF7L2Q9NQB0 619 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 MTMR10Q9NXD2 777 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 ZNHIT2Q9UHR6 403 aa18.21■□□□□ 0.51
NUP54-205ENST00000507257 IGKV6D-21A0A0A0MT36 114 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 PCSK6P29122 969 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 ADORA2AP29274 412 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 GP5P40197 560 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
NUP54-205ENST00000507257 DPYSQ14117 519 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 STILQ15468 1287 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 SH3PXD2AQ5TCZ1 1133 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 ZNF554Q86TJ5 538 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 CHERPQ8IWX8 916 aaKnown RBP18.2■□□□□ 0.5
NUP54-205ENST00000507257 TMEM176AQ96HP8 235 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 VRTNQ9H8Y1 702 aa18.2■□□□□ 0.5
NUP54-205ENST00000507257 RSL24D1Q9UHA3 163 aaKnown RBP18.2■□□□□ 0.5
NUP54-205ENST00000507257 KPNA7A9QM74 516 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 TADA2AO75478 443 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 THOP1P52888 689 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 RAB15P59190 212 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 TUBA4AP68366 448 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 PPIDQ08752 370 aaKnown RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 SLC9B1Q4ZJI4 515 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 GRTP1Q5TC63 336 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 LILRA2Q8N149 483 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 EFCAB3Q8N7B9 438 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 TMEM102Q8N9M5 508 aaPredicted RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 CPNE1Q99829 537 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ZNF385DQ9H6B1 395 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 PCDHGB4Q9UN71 923 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 PCDHGB5Q9Y5G0 923 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 M0QYV0 167 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 VWA5AO00534 786 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ZMPSTE24O75844 475 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ATP6V1B1P15313 513 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ME2P23368 584 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ICAM3P32942 547 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 NUDT2P50583 147 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 OAZ1P54368 228 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 MRPS22P82650 360 aaKnown RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 PEX6Q13608 980 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 LPIN1Q14693 890 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 C15orf59Q2T9L4 293 aaPredicted RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 CCDC14Q49A88 953 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms