RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 THSD1Q9NS62 852 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC52A1Q9NWF4 448 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 GEMIN8Q9NWZ8 242 aaKnown RBP3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 RAB21Q9UL25 225 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 CA14Q9ULX7 337 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 PCDHA12Q9UN75 941 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SPATA31A5Q5VU36 1347 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SPATA31A7Q8IWB4 1347 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAM90A10PA6NDY2 464 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 HNRNPDLO14979 420 aaKnown RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 INSIG1O15503 277 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 NKX2-8O15522 239 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 DNPH1O43598 174 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 SNHG28P0DPA3 235 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 NPPBP16860 134 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 HTR6P50406 440 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TWIST1Q15672 202 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 INPP5JQ15735 1006 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 SMTNL2Q2TAL5 461 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 MAP9Q49MG5 647 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 KIAA1755Q5JYT7 1200 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 DGKKQ5KSL6 1271 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 ASPHD1Q5U4P2 390 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 ARL6IP4Q66PJ3 421 aaKnown RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TTLL5Q6EMB2 1281 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZNF517Q6ZMY9 492 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 RFX8Q6ZV50 586 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 B4GALNT4Q76KP1 1039 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 PIM3Q86V86 326 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TTC30AQ86WT1 665 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 EXD3Q8N9H8 876 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC44A5Q8NCS7 719 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 OR1N1Q8NGS0 311 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 MPLKIPQ8TAP9 179 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 STYXQ8WUJ0 223 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 ASB5Q8WWX0 329 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 NLRP4Q96MN2 994 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 PRPF18Q99633 342 aaKnown RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TUBB6Q9BUF5 446 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 MECRQ9BV79 373 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TM7SF3Q9NS93 570 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 AGO2Q9UKV8 859 aaKnown RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TRPC5Q9UL62 973 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 TTC3P53804 2025 aa3.87□□□□□ -1.79
HMGB1P29-201ENST00000505659 KIR2DS5A0A0G2JLQ3 304 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 KIR2DS3K7RE56 304 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 ATG13O75143 517 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 USP12O75317 370 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 GLP2RO95838 553 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 ALPLP05186 524 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 CHRNB1P11230 501 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 SERPINB3P29508 390 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 PPM1AP35813 382 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 ALDH18A1P54886 795 aaKnown RBP3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 FOXL2P58012 376 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 RPL15P61313 204 aaKnown RBP3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 PRTGQ2VWP7 1150 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 BTBD16Q32M84 506 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 MANEAQ5SRI9 462 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 RINT1Q6NUQ1 792 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 WDR93Q6P2C0 686 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 GGT6Q6P531 493 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZNF549Q6P9A3 640 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC39A5Q6ZMH5 540 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 C9orf47Q6ZRZ4 202 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 TRABD2AQ86V40 505 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 DDIASQ8IXT1 998 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 SYTL1Q8IYJ3 562 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAM186BQ8IYM0 893 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 TMEM199Q8N511 208 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 OR52N4Q8NGI2 321 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 CLEC4CQ8WTT0 213 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 KAT2AQ92830 837 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 PMM1Q92871 262 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAR2Q96K12 515 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 TNIP3Q96KP6 325 aa3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 OSBPL5Q9H0X9 879 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 IPO11Q9UI26 975 aaKnown RBP3.86□□□□□ -1.79
HMGB1P29-201ENST00000505659 CXorf65A6NEN9 183 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 RHODO00212 210 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 ALDOCP09972 364 aaKnown RBP3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 GYS1P13807 737 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 IL6STP40189 918 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 PPATQ06203 517 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 RAPGEF1Q13905 1077 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 STARD3Q14849 445 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 GLE1Q53GS7 698 aaKnown RBP3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 ARL13AQ5H913 290 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 PIK3CD-AS1Q5SR53 167 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 CCDC181Q5TID7 509 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZDHHC17Q8IUH5 632 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 SRFBP1Q8NEF9 429 aaKnown RBP3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 IP6K1Q92551 441 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 CCDC134Q9H6E4 229 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 DECR2Q9NUI1 292 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 FBXO4Q9UKT5 387 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC12A4Q9UP95 1085 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC8A2Q9UPR5 921 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms