RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SULT1E1P49888 294 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 SCNN1GP51170 649 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 ITKQ08881 620 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 C16orf72Q14CZ0 275 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 EXD1Q8NHP7 514 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 LRRC37BQ96QE4 947 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 LRMDAQ9H2I8 198 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 FZD8Q9H461 694 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 SSC5DA1L4H1 1573 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 M0QYT0 321 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 CYB561D2O14569 222 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 PABPC4LP0CB38 370 aaKnown RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 CCNB1P14635 433 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 KDELR1P24390 212 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 MROH9Q5TGP6 573 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 DENND5BQ6ZUT9 1274 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 TTC1Q99614 292 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 STMN4Q9H169 189 aaPredicted RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 MATN2O00339 956 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 KRT4P19013 534 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 FBXO47Q5MNV8 452 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 ARHGEF18Q6ZSZ5 1173 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 DGCR14Q96DF8 476 aaKnown RBP12.68□□□□□ -0.38
USP11-206ENST00000469080 KCNK16Q96T55 309 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
USP11-206ENST00000469080 MYADML2A6NDP7 307 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 MAPK13O15264 365 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 LIASO43766 372 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 DDHD2O94830 711 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 IL18RAPO95256 599 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 NCAM1P13591 858 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PCYT1AP49585 367 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 DDHD1Q8NEL9 900 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
USP11-206ENST00000469080 LGMNQ99538 433 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 C16orf70Q9BSU1 422 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 GBA3Q9H227 469 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 FLRT1Q9NZU1 646 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 TXNDC16Q9P2K2 825 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 SLC17A6Q9P2U8 582 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
USP11-206ENST00000469080 TTC3P53804 2025 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ATP5HO75947 161 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PHBP35232 272 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 RPL22P35268 128 aaKnown RBP12.67□□□□□ -0.38
USP11-206ENST00000469080 BRCC3P46736 316 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 GBE1Q04446 702 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 CNGA2Q16280 664 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 C15orf39Q6ZRI6 1047 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ARHGAP24Q8N264 748 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 CD101Q93033 1021 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PAAF1Q9BRP4 392 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ATXN3LQ9H3M9 355 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 NUP205Q92621 2012 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PSTPIP1O43586 416 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 EDNRBP24530 442 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PBX3P40426 434 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ARL4AP40617 200 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ELK3P41970 407 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 POU5F1Q01860 360 aaKnown RBP12.67□□□□□ -0.38
USP11-206ENST00000469080 CCNG2Q16589 344 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 SLC27A1Q6PCB7 646 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 AVENQ9NQS1 362 aaPredicted RBP12.67□□□□□ -0.38
USP11-206ENST00000469080 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
USP11-206ENST00000469080 hCG_1818297A0A087WSY0 165 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 KPNA7A9QM74 516 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 TEX28O15482 410 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 RNASEH1O60930 286 aaKnown RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 MT-ND3P03897 115 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 USP17L7P0C7H9 530 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 GMPRP36959 345 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 GRIA1P42261 906 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 SKIV2L2P42285 1042 aaKnown RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 ARL4CP56559 192 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 DSG1Q02413 1049 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 CTC1Q2NKJ3 1217 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 NEPROQ6NW34 567 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 BPHLQ86WA6 291 aaPredicted RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 DEFB106AQ8N104 65 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms