RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RHBDL2Q9NX52 303 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 COPG2Q9UBF2 871 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 F8VP50 259 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ALOX15BO15296 676 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 PGK2P07205 417 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 CCDC159P0C7I6 412 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ATP6V1C1P21283 382 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 LHX1P48742 406 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TRIM60Q495X7 471 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 USP50Q70EL3 339 aaPredicted RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 LZTR1Q8N653 840 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ALLCQ8N6M5 410 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 OR6Y1Q8NGX8 325 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 PRCCQ92733 491 aaPredicted RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 A1CFQ9NQ94 594 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 IMPAD1Q9NX62 359 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 CTNNAL1Q9UBT7 734 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 A0A087WXM4 84 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 C15orf38-AP3S2A0A0A6YYH1 394 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MEIS2O14770 477 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 OPLAHO14841 1288 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 DCXO43602 365 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 PROCP04070 461 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 CXCL8P10145 99 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 RAG1P15918 1043 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MAPK1P28482 360 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 HARS2P49590 506 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 FMO1Q01740 532 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS36-201ENST00000378060 TMEM62Q0P6H9 643 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MRPL28Q13084 256 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 GTF2H3Q13889 308 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 FBXO47Q5MNV8 452 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 FKBP1CQ5VVH2 108 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ARPINQ7Z6K5 226 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 SNRNP27Q8WVK2 155 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 CDCA5Q96FF9 252 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ZNF512Q96ME7 567 aaPredicted RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 HSD17B14Q9BPX1 270 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MROH8Q9H579 483 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TMEM134Q9H6X4 195 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 RMND5AQ9H871 391 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 POLG2Q9UHN1 485 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 CORO1CQ9ULV4 474 aaPredicted RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 POLIQ9UNA4 740 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TSC22D4Q9Y3Q8 395 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 EDF1O60869 148 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 TKTP29401 623 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 AVPR1AP37288 418 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 PTDSS1P48651 473 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 NDST1P52848 882 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 YWHAZP63104 245 aaKnown RBP8.58□□□□□ -1.04
VPS36-201ENST00000378060 PPATQ06203 517 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ATP6AP1LQ52LC2 224 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 GLRA4Q5JXX5 417 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 DHFR2Q86XF0 187 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 ADGRF2Q8IZF7 708 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 TBC1D19Q8N5T2 526 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 POU5F2Q8N7G0 328 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 BLOC1S5Q8TDH9 187 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 NEUROG2Q9H2A3 272 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 NMRAL1Q9HBL8 299 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 MYH4Q9Y623 1939 aa8.58□□□□□ -1.04
VPS36-201ENST00000378060 SMIM31A0A1B0GVY4 71 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ANKRD63C9JTQ0 380 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CYB561D2O14569 222 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 AHCYL1O43865 530 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 KRT75O95678 551 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RPLP2P05387 115 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 HMBSP08397 361 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CSHL1Q14406 222 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CCDC85BQ15834 202 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 ARHGAP22Q7Z5H3 698 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 KCNMB4Q86W47 210 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ALG3Q92685 438 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 NR1H4Q96RI1 486 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 CDRT15Q96T59 188 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 APOL2Q9BQE5 337 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 MUC3BQ9H195 1237 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 NMRK1Q9NWW6 199 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 WWOXQ9NZC7 414 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 BTBD7Q9P203 1132 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 NR5A2O00482 541 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CLOCKO15516 846 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CRTAMO95727 393 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 C6orf222P0C671 652 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms