RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 HJURPQ8NCD3 748 aaPredicted RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DQX1Q8TE96 717 aaKnown RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DNASE2BQ8WZ79 361 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 TMEM245Q9H330 911 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 SUN2Q9UH99 717 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 PCDH15Q96QU1 1955 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 SART1O43290 800 aaKnown RBP20.18■□□□□ 0.82
ITGA4-202ENST00000339307 GPD2P43304 727 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 ACADSBP45954 432 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 RING1Q06587 406 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 CDH18Q13634 790 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 PTPRNQ16849 979 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 MPP7Q5T2T1 576 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 NADSYN1Q6IA69 706 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.18■□□□□ 0.82
ITGA4-202ENST00000339307 ZNF557Q8N988 423 aaPredicted RBP20.18■□□□□ 0.82
ITGA4-202ENST00000339307 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 ZDHHC5Q9C0B5 715 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 PRSS16Q9NQE7 514 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 TLR6Q9Y2C9 796 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 CEP83Q9Y592 693 aa20.18■□□□□ 0.82
ITGA4-202ENST00000339307 ACSL1P33121 698 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 RPS24P62847 133 aaKnown RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 SLC14A1Q13336 389 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 TRIP6Q15654 476 aaKnown RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 CAMK4Q16566 473 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 ARHGAP44Q17R89 818 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 SETD7Q8WTS6 366 aaKnown RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 BTBD1Q9H0C5 482 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 NUCKS1Q9H1E3 243 aaKnown RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 MTG2Q9H4K7 406 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 C6orf106Q9H6K1 298 aaPredicted RBP20.17■□□□□ 0.82
ITGA4-202ENST00000339307 GAREM1Q9H706 876 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 WASF3Q9UPY6 502 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 NFE2L3Q9Y4A8 694 aa20.17■□□□□ 0.82
ITGA4-202ENST00000339307 FSBPO95073 299 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 IGLV3-19P01714 112 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 APOEP02649 317 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 FYNP06241 537 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 GNA15P30679 374 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 RPS14P62263 151 aaKnown RBP20.16■□□□□ 0.82
ITGA4-202ENST00000339307 HNRNPDQ14103 355 aaKnown RBP20.16■□□□□ 0.82
ITGA4-202ENST00000339307 TTC31Q49AM3 519 aaPredicted RBP20.16■□□□□ 0.82
ITGA4-202ENST00000339307 SYPL2Q5VXT5 272 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 GJB7Q6PEY0 223 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 FOXR2Q6PJQ5 311 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 TAC4Q86UU9 113 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 NAXDQ8IW45 347 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 AZIN2Q96A70 460 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 PRICKLE1Q96MT3 831 aaPredicted RBP20.16■□□□□ 0.82
ITGA4-202ENST00000339307 TRIM62Q9BVG3 475 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 IL21RQ9HBE5 538 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 ACP6Q9NPH0 428 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 ZMIZ1Q9ULJ6 1067 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 CKAP5Q14008 2032 aa20.16■□□□□ 0.82
ITGA4-202ENST00000339307 FAM47DPA6NHR8 397 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 H0Y626 953 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 CSKP41240 450 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 MATKP42679 507 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 CSNK1EP49674 416 aaKnown RBP20.15■□□□□ 0.82
ITGA4-202ENST00000339307 MARSP56192 900 aaKnown RBP20.15■□□□□ 0.82
ITGA4-202ENST00000339307 ZNF776Q68DI1 518 aaPredicted RBP20.15■□□□□ 0.82
ITGA4-202ENST00000339307 MMS22LQ6ZRQ5 1243 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 KIAA0907Q7Z7F0 614 aaPredicted RBP20.15■□□□□ 0.82
ITGA4-202ENST00000339307 LGI2Q8N0V4 545 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 CHCHD4Q8N4Q1 142 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 FIBINQ8TAL6 211 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 ZNF606Q8WXB4 792 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 MYEOVQ96EZ4 313 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 IRX2Q9BZI1 471 aaPredicted RBP20.15■□□□□ 0.82
ITGA4-202ENST00000339307 FBRSQ9HAH7 460 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 TJP2Q9UDY2 1190 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 KLK13Q9UKR3 277 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 NCKAP1Q9Y2A7 1128 aa20.15■□□□□ 0.82
ITGA4-202ENST00000339307 KMT2BQ9UMN6 2715 aaPredicted RBP20.14■□□□□ 0.81
ITGA4-202ENST00000339307 SYNJ2BP-COX16A0A087WUM0 186 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 A0A1B0GVT2 93 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 E5RJQ4 531 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 RNASEH1O60930 286 aaKnown RBP20.14■□□□□ 0.81
ITGA4-202ENST00000339307 TRIM16O95361 564 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 MOCS3O95396 460 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 SEMA4FO95754 770 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 CER1O95813 267 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 NUMBP49757 651 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 HLA-BQ31612 363 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 ZC3H12AQ5D1E8 599 aaKnown RBP20.14■□□□□ 0.81
ITGA4-202ENST00000339307 MS4A13Q5J8X5 152 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 RAP1GAP2Q684P5 730 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 IL27RAQ6UWB1 636 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 CHSY1Q86X52 802 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 DHX40Q8IX18 779 aaKnown RBP20.14■□□□□ 0.81
ITGA4-202ENST00000339307 RNF34Q969K3 372 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 MED15Q96RN5 788 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 POPDC2Q9HBU9 364 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 COX16Q9P0S2 106 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 XPO7Q9UIA9 1087 aaKnown RBP20.14■□□□□ 0.81
ITGA4-202ENST00000339307 CNTN6Q9UQ52 1028 aa20.14■□□□□ 0.81
ITGA4-202ENST00000339307 PCNX2A6NKB5 2137 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 PAPSS1O43252 624 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms