RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 R3HDM2Q9Y2K5 976 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 C5orf60A6NFR6 353 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 PI4K2BG5E9Z4 385 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 PRRG1O14668 218 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 MCF2LO15068 1137 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 TTI1O43156 1089 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 GCATO75600 419 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 SYN1P17600 705 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 RPL17P18621 184 aaKnown RBP11.25□□□□□ -0.61
PABPN1-203ENST00000553960 MX2P20592 715 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 CDC25CP30307 473 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 TBX4P57082 545 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 CDK16Q00536 496 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 OTUD4Q01804 1114 aaKnown RBP11.25□□□□□ -0.61
PABPN1-203ENST00000553960 NAA30Q147X3 362 aaPredicted RBP11.25□□□□□ -0.61
PABPN1-203ENST00000553960 PDK1Q15118 436 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 P3H1Q32P28 736 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 NCBP2-AS2Q69YL0 99 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 FBXO38Q6PIJ6 1188 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 HOOK3Q86VS8 718 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 TMC8Q8IU68 726 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 CCDC105Q8IYK2 499 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 UMODL1-AS1Q8N2C9 162 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 KREMEN2Q8NCW0 462 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 EDEM1Q92611 657 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 ART4Q93070 314 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 VAT1Q99536 393 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 TCF25Q9BQ70 676 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 HEMGNQ9BXL5 484 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 KLC2Q9H0B6 622 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 PRO3102Q9H379 93 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 ANLNQ9NQW6 1124 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 GRHL1Q9NZI5 618 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 DTLQ9NZJ0 730 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 LMCD1Q9NZU5 365 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 DNPEPQ9ULA0 475 aa11.25□□□□□ -0.61
PABPN1-203ENST00000553960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 EEF2KO00418 725 aaKnown RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 MAP2K7O14733 419 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 PAGE1O75459 146 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 LRIG2O94898 1065 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 SEC31AO94979 1220 aaKnown RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 APOEP02649 317 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 RHOXF2BP0C7M4 288 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 RBP3P10745 1247 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 RHOQP17081 205 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 GOT1P17174 413 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 DNAJB1P25685 340 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 CLCN6P51797 869 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 NDST2P52849 883 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 ATXN1P54253 815 aaKnown RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 ARPP19P56211 112 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 GALNT2Q10471 571 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 NME3Q13232 169 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 PRKD1Q15139 912 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 MPP7Q5T2T1 576 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 PCGF5Q86SE9 256 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 NLRP14Q86W24 1093 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 CDKL3Q8IVW4 592 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 KLHL7Q8IXQ5 586 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 HDAC11Q96DB2 347 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 QKIQ96PU8 341 aaKnown RBP eCLIP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 RHOXF2Q9BQY4 288 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 KLF16Q9BXK1 252 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-203ENST00000553960 TXLNGYQ9BZA5 131 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 CATSPERBQ9H7T0 1116 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 EPB41L5Q9HCM4 733 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 TMEM248Q9NWD8 314 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 SHOC2Q9UQ13 582 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 CHD9Q3L8U1 2897 aa11.24□□□□□ -0.61
PABPN1-203ENST00000553960 TRANK1O15050 2925 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 C2CD2LO14523 706 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 CACNG3O60359 315 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 GREM1O60565 184 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 LPXNO60711 386 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 ERCC2P18074 760 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 POU3F3P20264 500 aaPredicted RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 IFNAR2P48551 515 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 MAPKAPK2P49137 400 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 TPI1P60174 286 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 PPIDQ08752 370 aaKnown RBP11.23□□□□□ -0.61
PABPN1-203ENST00000553960 TWF1Q12792 350 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
PABPN1-203ENST00000553960 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms