RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 PGBD3Q8N328 593 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 SORCS1Q8WY21 1168 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 PRICKLE1Q96MT3 831 aaPredicted RBP25.05■■□□□ 1.6
SRPK1-210ENST00000508473 DDX50Q9BQ39 737 aaKnown RBP25.05■■□□□ 1.6
SRPK1-210ENST00000508473 CIPCQ9C0C6 399 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 DAAM1Q9Y4D1 1078 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 RAD54BQ9Y620 910 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 GVINP1Q7Z2Y8 2422 aa25.05■■□□□ 1.6
SRPK1-210ENST00000508473 WASH3PC4AMC7 463 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 LSM8O95777 96 aaKnown RBP25.04■■□□□ 1.6
SRPK1-210ENST00000508473 CHRNB2P17787 502 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 HLA-FP30511 346 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 NOMO3P69849 1222 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 CDR2Q01850 454 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 ARID5AQ03989 594 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 IQCB1Q15051 598 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 USP39Q53GS9 565 aaKnown RBP25.04■■□□□ 1.6
SRPK1-210ENST00000508473 RAP1GAP2Q684P5 730 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 ZNF677Q86XU0 584 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 ZDHHC17Q8IUH5 632 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 RNF34Q969K3 372 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 ABCB8Q9NUT2 735 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 ELOVL2Q9NXB9 296 aa25.04■■□□□ 1.6
SRPK1-210ENST00000508473 A0A1W2PQF6 199 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 GOLGA8SH3BPF8 625 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 RETP07949 1114 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 GBP1P32455 592 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 GABRB2P47870 512 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 RPS24P62847 133 aaKnown RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 FMO1Q01740 532 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 NME3Q13232 169 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 EIF4EBP2Q13542 120 aaPredicted RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 MS4A13Q5J8X5 152 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 FAM102AQ5T9C2 384 aaPredicted RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 TMEM215Q68D42 235 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 KIAA1211LQ6NV74 962 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 XYLT1Q86Y38 959 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 CFAP52Q8N1V2 620 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 HJURPQ8NCD3 748 aaPredicted RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 ZNF397Q8NF99 534 aaPredicted RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 WFDC5Q8TCV5 224 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 UCMAQ8WVF2 138 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 RLN3Q8WXF3 142 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 RTN4Q9NQC3 1192 aaKnown RBP25.03■■□□□ 1.6
SRPK1-210ENST00000508473 STON1Q9Y6Q2 735 aa25.03■■□□□ 1.6
SRPK1-210ENST00000508473 SDK1Q7Z5N4 2213 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 PTMSP20962 102 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 NOS2P35228 1153 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 SPEM2Q0P670 501 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 CHST9Q7L1S5 443 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 CHSY1Q86X52 802 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 LGI2Q8N0V4 545 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 ATP6V0D2Q8N8Y2 350 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 BTN2A3PQ96KV6 586 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 GABRG3Q99928 467 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 CBX8Q9HC52 389 aa25.02■■□□□ 1.6
SRPK1-210ENST00000508473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.02■■□□□ 1.6
SRPK1-210ENST00000508473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.02■■□□□ 1.6
SRPK1-210ENST00000508473 THAP10Q9P2Z0 257 aaPredicted RBP25.02■■□□□ 1.6
SRPK1-210ENST00000508473 M0QYT0 321 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 GABRG2P18507 467 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 TACR2P21452 398 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 MATKP42679 507 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 IL12RB1P42701 662 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 PLK5Q496M5 336 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 FILIP1LQ4L180 1135 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 MPP7Q5T2T1 576 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 PHLDB2Q86SQ0 1253 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 MFN1Q8IWA4 741 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 CARNMT1Q8N4J0 409 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 MSANTD4Q8NCY6 345 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 IRX2Q9BZI1 471 aaPredicted RBP25.01■■□□□ 1.59
SRPK1-210ENST00000508473 PARD6AQ9NPB6 346 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 CALCOCO1Q9P1Z2 691 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 SLC12A6Q9UHW9 1150 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 GGA2Q9UJY4 613 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 USP18Q9UMW8 372 aa25.01■■□□□ 1.59
SRPK1-210ENST00000508473 TYW5A2RUC4 315 aaKnown RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 KCNU1A8MYU2 1149 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 CYP1A1P04798 512 aaPredicted RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 PABPC1P11940 636 aaKnown RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 TFE3P19532 575 aaPredicted RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 ABCB4P21439 1286 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 BCKDHBP21953 392 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 CCR1P32246 355 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 CD70P32970 193 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 SULT1E1P49888 294 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 ZNF234Q14588 700 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 EIF4HQ15056 248 aaKnown RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 OTUD1Q5VV17 481 aaPredicted RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 MMS22LQ6ZRQ5 1243 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 LUZP1Q86V48 1076 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 FRMD1Q8N878 549 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 SLC30A5Q8TAD4 765 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 OLIG1Q8TAK6 271 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 WFIKKN2Q8TEU8 576 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 CYB5D2Q8WUJ1 264 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 NAP1L5Q96NT1 182 aaPredicted RBP25■■□□□ 1.59
SRPK1-210ENST00000508473 PCDHB18PQ96TA0 734 aa25■■□□□ 1.59
SRPK1-210ENST00000508473 ADAM33Q9BZ11 813 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms