RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ZNF670Q9BS34 389 aa18.26■□□□□ 0.51
NUP54-205ENST00000507257 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
NUP54-205ENST00000507257 TMEM114B3SHH9 223 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 DPYSL4O14531 572 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 TPP1O14773 563 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 TOP3BO95985 862 aaKnown RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 OATP04181 439 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 GLDCP23378 1020 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 HK2P52789 917 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 MTMR2Q13614 643 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 ACBD5Q5T8D3 534 aaPredicted RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 C16orf46Q6P387 395 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 ATG14Q6ZNE5 492 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 FAM83AQ86UY5 434 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 C10orf107Q8IVU9 208 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 PHTF2Q8N3S3 785 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 TRPC4APQ8TEL6 797 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 CDH19Q9H159 772 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 CPSF3Q9UKF6 684 aaKnown RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 H2AFYO75367 372 aaKnown RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 RGS20O76081 388 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 NCF2P19878 526 aaPredicted RBP18.25■□□□□ 0.51
NUP54-205ENST00000507257 TNFSF9P41273 254 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 EFNA5P52803 228 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 MPP5Q8N3R9 675 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 NAT9Q9BTE0 207 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 PARP14Q460N5 1801 aa18.25■□□□□ 0.51
NUP54-205ENST00000507257 PRSS51A0A1B0GVH4 220 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 DCXO43602 365 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 ZBTB14O43829 449 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 B4GALT4O60513 344 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 TRMUO75648 421 aaKnown RBP18.24■□□□□ 0.51
NUP54-205ENST00000507257 HMGCRP04035 888 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 HOXC6P09630 235 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 ARRB2P32121 409 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 MAGEA12P43365 314 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 ADARP55265 1226 aaKnown RBP18.24■□□□□ 0.51
NUP54-205ENST00000507257 PIGGQ5H8A4 983 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 FAM102AQ5T9C2 384 aaPredicted RBP18.24■□□□□ 0.51
NUP54-205ENST00000507257 RSPH3Q86UC2 560 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 HIPK4Q8NE63 616 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 KBTBD7Q8WVZ9 684 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 DNAJC1Q96KC8 554 aaKnown RBP18.24■□□□□ 0.51
NUP54-205ENST00000507257 HAUS8Q9BT25 410 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 MRPL4Q9BYD3 311 aaKnown RBP18.24■□□□□ 0.51
NUP54-205ENST00000507257 GRIP2Q9C0E4 1043 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 MAF1Q9H063 256 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 PCDH18Q9HCL0 1135 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 TBCCD1Q9NVR7 557 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 AK5Q9Y6K8 562 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 ANK1P16157 1881 aa18.24■□□□□ 0.51
NUP54-205ENST00000507257 LOC100653049A0A140TA62 436 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 SPATA31C2B4DYI2 1134 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 MDM4O15151 490 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 MSCO60682 206 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 KRT34O76011 436 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 MICAL2O94851 1124 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 METTL18O95568 372 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 CDH2P19022 906 aaPredicted RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 GPD2P43304 727 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 PTPN11Q06124 597 aaPredicted RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 CAPSQ13938 189 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 BAATQ14032 418 aaPredicted RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 HERC3Q15034 1050 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 ZNF423Q2M1K9 1284 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 DHRS4L2Q6PKH6 230 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 SCARA5Q6ZMJ2 495 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 KYQ8NBH2 561 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 RP9Q8TA86 221 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 PCDH19Q8TAB3 1148 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 NSUN6Q8TEA1 469 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 CEPT1Q9Y6K0 416 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 SQORQ9Y6N5 450 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 RGSL1A5PLK6 1076 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 COQ9O75208 318 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 TNNC2P02585 160 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 SLC5A2P31639 672 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 NR2C2P49116 596 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 ERI1Q8IV48 349 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 CROCCP3Q8IVE0 287 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 CDAN1Q8IWY9 1227 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 CPSF7Q8N684 471 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 RXFP2Q8WXD0 754 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 BIRC8Q96P09 236 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 COG4Q9H9E3 785 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 EIF2B3Q9NR50 452 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
NUP54-205ENST00000507257 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
NUP54-205ENST00000507257 CLRN2A0PK11 232 aa18.22■□□□□ 0.51
NUP54-205ENST00000507257 STK10O94804 968 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms