RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SNX19Q92543 992 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 ZSWIM1Q9BR11 485 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 GGA2Q9UJY4 613 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.24■□□□□ 0.83
ITGA4-202ENST00000339307 C1QTNF9BB2RNN3 333 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 P4HA2O15460 535 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 GABBR2O75899 941 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 C1QTNF9P0C862 333 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 SGSHP51688 502 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 COPAP53621 1224 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 NUGGCQ68CJ6 796 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 SCUBE3Q8IX30 993 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 ELOA2Q8IYF1 753 aaPredicted RBP20.23■□□□□ 0.83
ITGA4-202ENST00000339307 SCML4Q8N228 414 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 ZCCHC9Q8N567 271 aaKnown RBP20.23■□□□□ 0.83
ITGA4-202ENST00000339307 WFIKKN2Q8TEU8 576 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 FAM149B1Q96BN6 582 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 NUP58Q9BVL2 599 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 SCNM1Q9BWG6 230 aa20.23■□□□□ 0.83
ITGA4-202ENST00000339307 SRRTQ9BXP5 876 aaKnown RBP20.23■□□□□ 0.83
ITGA4-202ENST00000339307 ASCC3Q8N3C0 2202 aaKnown RBP20.23■□□□□ 0.83
ITGA4-202ENST00000339307 PMM2O15305 246 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 FBXO21O94952 628 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 LATS1O95835 1130 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 GNA14O95837 355 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 AFPP02771 609 aaKnown RBP20.22■□□□□ 0.83
ITGA4-202ENST00000339307 PABPC1P11940 636 aaKnown RBP20.22■□□□□ 0.83
ITGA4-202ENST00000339307 POLR2EP19388 210 aaKnown RBP20.22■□□□□ 0.83
ITGA4-202ENST00000339307 BMP6P22004 513 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 PAK1Q13153 545 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 MORC3Q14149 939 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 MBLAC2Q68D91 279 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 UNQ6494/PRO21346Q6UXR6 183 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 AHI1Q8N157 1196 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 LMO3Q8TAP4 145 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 HSFY1Q96LI6 401 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 INTS2Q9H0H0 1204 aaKnown RBP20.22■□□□□ 0.83
ITGA4-202ENST00000339307 STOML2Q9UJZ1 356 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 PCDHB9Q9Y5E1 797 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 MAP1BP46821 2468 aaKnown RBP20.22■□□□□ 0.83
ITGA4-202ENST00000339307 EPG5Q9HCE0 2579 aa20.22■□□□□ 0.83
ITGA4-202ENST00000339307 A0A1B0GTW7 788 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 TYW5A2RUC4 315 aaKnown RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 CAPN9O14815 690 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 ACSL4O60488 711 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 GADD45BO75293 160 aaPredicted RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 ATP5BP06576 529 aaKnown RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 RDXP35241 583 aaKnown RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 GCNT1Q02742 428 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 MSANTD2Q6P1R3 559 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 MFN1Q8IWA4 741 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 CCDC117Q8IWD4 279 aaPredicted RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 CADM4Q8NFZ8 388 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 OR2T3Q8NH03 318 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 ADAM33Q9BZ11 813 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 LHX5Q9H2C1 402 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 UBE2TQ9NPD8 197 aaPredicted RBP20.21■□□□□ 0.83
ITGA4-202ENST00000339307 CHD8Q9HCK8 2581 aa20.21■□□□□ 0.83
ITGA4-202ENST00000339307 HYAL3O43820 417 aaPredicted RBP20.2■□□□□ 0.82
ITGA4-202ENST00000339307 MOCS2O96007 188 aaPredicted RBP20.2■□□□□ 0.82
ITGA4-202ENST00000339307 PROS1P07225 676 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 SLC6A4P31645 630 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 CD70P32970 193 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 GRIK2Q13002 908 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 PIK3R6Q5UE93 754 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 PIP4P1Q86T03 277 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 ADIPOR2Q86V24 386 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 TRIM59Q8IWR1 403 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 ADAM32Q8TC27 787 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 DDX50Q9BQ39 737 aaKnown RBP20.2■□□□□ 0.82
ITGA4-202ENST00000339307 EIF2B4Q9UI10 523 aaKnown RBP20.2■□□□□ 0.82
ITGA4-202ENST00000339307 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
ITGA4-202ENST00000339307 METTL12A8MUP2 240 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 SH3BP5O60239 455 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 FGFR1OPO95684 399 aaKnown RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 USP8P40818 1118 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DENND1BQ6P3S1 775 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 CARNMT1Q8N4J0 409 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 WFDC5Q8TCV5 224 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 GANCQ8TET4 914 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 KREMEN1Q96MU8 473 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 CAMK1GQ96NX5 476 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 SERPINB11Q96P15 392 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DNAAF2Q9NVR5 837 aaKnown RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 UPK3BL1B0FP48 263 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 UPK3BL2E5RIL1 263 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 BCAT2O15382 392 aaPredicted RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 IRAK2O43187 625 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 THAP12O43422 761 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 MED7O43513 233 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 IGLV3-27P01718 113 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DNTTP04053 509 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 DLDP09622 509 aaKnown RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 CD59P13987 128 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 ST8SIA6P61647 398 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 FAM193AP78312 1265 aa20.19■□□□□ 0.82
ITGA4-202ENST00000339307 CAMK2GQ13555 558 aaPredicted RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 FAM133BQ5BKY9 247 aaKnown RBP20.19■□□□□ 0.82
ITGA4-202ENST00000339307 CFAP52Q8N1V2 620 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms