RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 PCDHB7Q9Y5E2 793 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 KRBA1A5PL33 1030 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 FAM187AA6NFU0 413 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 MIF4GDA9UHW6 222 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 IL18RAPO95256 599 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 STAMBPO95630 424 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CPEP16870 476 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 COL9A1P20849 921 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GBP1P32455 592 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 LSP1P33241 339 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 MAGEA10P43363 369 aaPredicted RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 BFSP1Q12934 665 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 PDCLQ13371 301 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM240Q5SV17 173 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 AGBL2Q5U5Z8 902 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 C16orf59Q7L2K0 433 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GPR155Q7Z3F1 870 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 SH2D3CQ8N5H7 860 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 LNX1Q8TBB1 728 aaPredicted RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 SEC14L1Q92503 715 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 LPPQ93052 612 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 MFSD14AQ96MC6 490 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 DDX47Q9H0S4 455 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 VPS37BQ9H9H4 285 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GGA2Q9UJY4 613 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 GIT1Q9Y2X7 761 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 TET1Q8NFU7 2136 aa12.03□□□□□ -0.48
LINC00538-201ENST00000626109 B2RBV5 119 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 BUB1BO60566 1050 aaPredicted RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 FGGP02679 453 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 LPOP22079 712 aaPredicted RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 ELF1P32519 619 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 HADHBP55084 474 aaKnown RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 WDR5P61964 334 aaKnown RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 GBE1Q04446 702 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 DHX34Q14147 1143 aaKnown RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 PPP1R7Q15435 360 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 ODF2Q5BJF6 829 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 TLDC1Q6P9B6 456 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 AGMOQ6ZNB7 445 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 PEX5LQ8IYB4 626 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 CCDC127Q96BQ5 260 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 SNX27Q96L92 541 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 CLUHP3Q96NS8 147 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 NT5C1BQ96P26 610 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 AGPAT1Q99943 283 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 WDR12Q9GZL7 423 aaKnown RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 ZWILCHQ9H900 591 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 UBP1Q9NZI7 540 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 AMACRQ9UHK6 382 aa12.02□□□□□ -0.49
LINC00538-201ENST00000626109 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.49
LINC00538-201ENST00000626109 LACTBL1A8MY62 500 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 EPN2O95208 641 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ECHS1P30084 290 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 MLH1P40692 756 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 VAMP7P51809 220 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ATXN1P54253 815 aaKnown RBP12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ENPEPQ07075 957 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 CDC16Q13042 620 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
LINC00538-201ENST00000626109 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 NUP54Q7Z3B4 507 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 CROCCP2Q86T23 111 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ABI1Q8IZP0 508 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 UCMAQ8WVF2 138 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 HERVK_113Q902F9 699 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 CEP295NLQ96MC4 621 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 RUNDC3BQ96NL0 473 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 CENPHQ9H3R5 247 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ASB7Q9H672 318 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 KLK14Q9P0G3 267 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 COG5Q9UP83 839 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 MICAL3Q7RTP6 2002 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 MEIS3P2A8K0S8 358 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 B4E171 279 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 DAPK3O43293 454 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ZBTB14O43829 449 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 FBXO21O94952 628 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 GOSR1O95249 250 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
LINC00538-201ENST00000626109 ABCB4P21439 1286 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 HNF4AP41235 474 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 DEFB103AP81534 67 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 SCARB2Q14108 478 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
LINC00538-201ENST00000626109 TRADDQ15628 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms