RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SNX16P57768 344 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 GEN1Q17RS7 908 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 RFWD3Q6PCD5 774 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 TAC4Q86UU9 113 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 FAM217AQ8IXS0 508 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 AOPEPQ8N6M6 819 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 IPO4Q8TEX9 1081 aaKnown RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 PIWIL1Q96J94 861 aaKnown RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 NAA15Q9BXJ9 866 aaKnown RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 STK33Q9BYT3 514 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
SREBF1-219ENST00000580540 NLRC4Q9NPP4 1024 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 CACNA2D2Q9NY47 1150 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 COX16Q9P0S2 106 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 STIM2Q9P246 746 aa17.3■□□□□ 0.36
SREBF1-219ENST00000580540 TBL1XO60907 577 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 LATS1O95835 1130 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 TRUB2O95900 331 aaKnown RBP17.29■□□□□ 0.36
SREBF1-219ENST00000580540 IGLV3-27P01718 113 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 ERBB2P04626 1255 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 ZNF445P59923 1031 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 UBXN1Q04323 297 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 RING1Q06587 406 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 EFHC1Q5JVL4 640 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 FAM183BPQ6ZVS7 135 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 DEFB106AQ8N104 65 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 UCMAQ8WVF2 138 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 RLN3Q8WXF3 142 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 CIPCQ9C0C6 399 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 LIMA1Q9UHB6 759 aaKnown RBP17.29■□□□□ 0.36
SREBF1-219ENST00000580540 STOML2Q9UJZ1 356 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 TLR6Q9Y2C9 796 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 SLC27A6Q9Y2P4 619 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 RAD54BQ9Y620 910 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 CFAP54Q96N23 3096 aa17.29■□□□□ 0.36
SREBF1-219ENST00000580540 WASH3PC4AMC7 463 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 F8VZ95 297 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 GFPT2O94808 682 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 APOEP02649 317 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 HOXD9P28356 352 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-219ENST00000580540 SLC6A4P31645 630 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 SGSHP51688 502 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 CDK17Q00537 523 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 ARID5AQ03989 594 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 SYCP1Q15431 976 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 ELF2Q15723 593 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 PLK5Q496M5 336 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 ZC3H12AQ5D1E8 599 aaKnown RBP17.28■□□□□ 0.36
SREBF1-219ENST00000580540 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 BEND5Q7L4P6 421 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 GPR161Q8N6U8 529 aaKnown RBP17.28■□□□□ 0.36
SREBF1-219ENST00000580540 RNF34Q969K3 372 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 DDX50Q9BQ39 737 aaKnown RBP17.28■□□□□ 0.36
SREBF1-219ENST00000580540 SLC2A11Q9BYW1 496 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 GANQ9H2C0 597 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 ARRDC1-AS1Q9H2J1 176 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 PARD6AQ9NPB6 346 aa17.28■□□□□ 0.36
SREBF1-219ENST00000580540 MAP3K13O43283 966 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 HSF2BPO75031 334 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 RHOBTB1O94844 696 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 RNASE9P60153 205 aaKnown RBP17.27■□□□□ 0.36
SREBF1-219ENST00000580540 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-219ENST00000580540 SLC6A3Q01959 620 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NNTQ13423 1086 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NCAPHQ15003 741 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 CCDC6Q16204 474 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.36
SREBF1-219ENST00000580540 PIK3R6Q5UE93 754 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NADSYN1Q6IA69 706 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NOP9Q86U38 636 aaKnown RBP17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NEK11Q8NG66 645 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 SORCS1Q8WY21 1168 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 AZIN2Q96A70 460 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 SLC39A13Q96H72 371 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 SPAG5Q96R06 1193 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 NUCKS1Q9H1E3 243 aaKnown RBP17.27■□□□□ 0.36
SREBF1-219ENST00000580540 ELOVL2Q9NXB9 296 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 STON1Q9Y6Q2 735 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 EML5Q05BV3 1969 aa17.27■□□□□ 0.36
SREBF1-219ENST00000580540 ZNF292O60281 2723 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 A0A1W2PQF6 199 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 TYW5A2RUC4 315 aaKnown RBP17.26■□□□□ 0.35
SREBF1-219ENST00000580540 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 EPHB6O15197 1021 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 IRAK2O43187 625 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 GLI1P08151 1106 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 MMEP08473 750 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 BCKDHBP21953 392 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 KIAA1211LQ6NV74 962 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 OLFML1Q6UWY5 402 aa17.26■□□□□ 0.35
SREBF1-219ENST00000580540 ERICH1Q86X53 443 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms