RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PROSCO94903 275 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 LINC00032P0C843 101 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SDC4P31431 198 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SLC26A3P40879 764 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FAM47CQ5HY64 1035 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 HMBOX1Q6NT76 420 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 MCOLN2Q8IZK6 566 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SNTG1Q9NSN8 517 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 WASF2Q9Y6W5 498 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 M0QX08 132 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 BST2Q10589 180 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 VPS26BQ4G0F5 336 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 KCNV1Q6PIU1 500 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TTC29Q8NA56 475 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 F8W810 466 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 AKAP3O75969 853 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SCGNO76038 276 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 GPD2P43304 727 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SLC16A1P53985 500 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CDH13P55290 713 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 RRP1BQ14684 758 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TYSND1Q2T9J0 566 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZHX1-C8orf76Q96EF9 292 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 MAGED4Q96JG8 741 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZC3H10Q96K80 434 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 HOXC10Q9NYD6 342 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PAK5Q9P286 719 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF24P17028 368 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FAM45AQ8TCE6 357 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PNPT1Q8TCS8 783 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PMEPA1Q969W9 287 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PHF20Q9BVI0 1012 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CMTM6Q9NX76 183 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SEPT9Q9UHD8 586 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF232Q9UNY5 417 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 NCOA1Q15788 1441 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FAM149AA5PLN7 773 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FNTBP49356 437 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CDK7P50613 346 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 WDR72Q3MJ13 1102 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PROX1Q92786 737 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 LENG8Q96PV6 779 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FAM49BQ9NUQ9 324 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 AREL1O15033 823 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TBX10O75333 385 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PMPCBO75439 489 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CRABP2P29373 138 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TALDO1P37837 337 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 RGS7P49802 495 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZMYND11Q15326 602 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 EDRF1Q3B7T1 1238 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CACHD1Q5VU97 1274 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 KIAA0408Q6ZU52 694 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ZSCAN5AQ9BUG6 496 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 OSGEPQ9NPF4 335 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 STOML2Q9UJZ1 356 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 LYPLA1O75608 230 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CASP4P49662 377 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 MRPS22P82650 360 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 GRM4Q14833 912 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 IL17AQ16552 155 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 UGT2B11O75310 529 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ANTXR2P58335 489 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 FSTL1Q12841 308 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ACSBG2Q5FVE4 666 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PDXDC2PQ6P474 469 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CLNKQ7Z7G1 428 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CBR4Q8N4T8 237 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 KRT35Q92764 455 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 AGO2Q9UKV8 859 aaKnown RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 AP4B1Q9Y6B7 739 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 RPS6KL1Q9Y6S9 549 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 G3V2T6 193 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TM9SF1O15321 606 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CYP1A2P05177 515 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 GNAZP19086 355 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 UGT8Q16880 541 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 DENND1BQ6P3S1 775 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ENOSF1Q7L5Y1 443 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM48Q8IWZ4 208 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 OSCARQ8IYS5 282 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 SH3RF3Q8TEJ3 882 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 MT-CO1P00395 513 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PAMP19021 973 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ADORA2BP29275 332 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 CDKL3Q8IVW4 592 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC71Q8N4P6 559 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ULK4Q96C45 1275 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 ADGRE2Q9UHX3 823 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 PARD3Q8TEW0 1356 aa3.78□□□□□ -1.8
ATXN3-248ENST00000558190 HEATR9A2RTY3 570 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 FAM25EA8MYX2 175 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 HIST1H2AGP0C0S8 130 aaPredicted RBP3.78□□□□□ -1.81
ATXN3-248ENST00000558190 PRKAR1AP10644 381 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 HIST1H2ADP20671 130 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 FOXO4P98177 505 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 CIAPIN1Q6FI81 312 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms