RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TRIML1Q8N9V2 468 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 NDRG1Q92597 394 aaKnown RBP20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 HSPA12BQ96MM6 686 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 CAPN10Q9HC96 672 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 NFE2L3Q9Y4A8 694 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 ATXN2Q99700 1313 aaKnown RBP20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 FBXO21O94952 628 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 SYPP08247 313 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 LCP1P13796 627 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 OXTRP30559 389 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 MAPK8P45983 427 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ARID5AQ03989 594 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ZNF234Q14588 700 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ST3GAL2Q16842 350 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 WDR45BQ5MNZ6 344 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ISM2Q6H9L7 571 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 KLHL10Q6JEL2 608 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 SLC41A1Q8IVJ1 513 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 UNC45BQ8IWX7 931 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 HDDC3Q8N4P3 179 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 DEFB119Q8N690 84 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ZNF557Q8N988 423 aaPredicted RBP20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 LMO3Q8TAP4 145 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 WFIKKN2Q8TEU8 576 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 NELFBQ8WX92 580 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 TFAP2BQ92481 460 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 EDEM1Q92611 657 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 GOLGA1Q92805 767 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 TMA16Q96EY4 203 aaKnown RBP20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 CIPCQ9C0C6 399 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 ITM2CQ9NQX7 267 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 USP36Q9P275 1121 aaKnown RBP20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 SFMBT1Q9UHJ3 866 aa20.83■□□□□ 0.93
UBE2D3-220ENST00000505307 PPP1R3GB7ZBB8 358 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 GIPC1O14908 333 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 GNSP15586 552 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 HOXD9P28356 352 aaPredicted RBP20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 MORC3Q14149 939 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 MPP7Q5T2T1 576 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 NUGGCQ68CJ6 796 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 PMF1Q6P1K2 205 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 TMPRSS6Q8IU80 811 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 EHBP1Q8NDI1 1231 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 CADM4Q8NFZ8 388 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 PRCCQ92733 491 aaPredicted RBP20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 SIPA1Q96FS4 1042 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 CLEC4EQ9ULY5 219 aa20.82■□□□□ 0.92
UBE2D3-220ENST00000505307 M0QYV0 167 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 ARHGAP33O14559 1287 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 FGFR1OPO95684 399 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 NCAM1P13591 858 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 SLC11A2P49281 568 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 MARSP56192 900 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 RING1Q06587 406 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 SERPINA13PQ6UXR4 307 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 TRIM59Q8IWR1 403 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 RGL4Q8IZJ4 473 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 AZIN2Q96A70 460 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 ERLEC1Q96DZ1 483 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 MKRN2Q9H000 416 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 SLC6A17Q9H1V8 727 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 WSB2Q9NYS7 404 aaPredicted RBP20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 PLA2G4CQ9UP65 541 aa20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 ASCC3Q8N3C0 2202 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-220ENST00000505307 CEP192Q8TEP8 1941 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 RNF225M0QZC1 329 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 IRAK2O43187 625 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 SART1O43290 800 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 OPHN1O60890 802 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 IGLV3-19P01714 112 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 LTFP02788 710 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 ACADMP11310 421 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 BMP6P22004 513 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 RGS7P49802 495 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 KCNH2Q12809 1159 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 SEMA3BQ13214 749 aa20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 TOE1Q96GM8 510 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 GTPBP2Q9BX10 602 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 MAP1BP46821 2468 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-220ENST00000505307 TSPAN3O60637 253 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 IGLV3-27P01718 113 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 AFPP02771 609 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 EPHX1P07099 455 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 BRD2P25440 801 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 HLA-FP30511 346 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 TPMTP51580 245 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 PAK1Q13153 545 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 SLC14A1Q13336 389 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 HNRNPDQ14103 355 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 MEA1Q16626 185 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 TMEM215Q68D42 235 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 RRAGAQ7L523 313 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 PIP4P1Q86T03 277 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 AHI1Q8N157 1196 aa20.79■□□□□ 0.92
UBE2D3-220ENST00000505307 DEFB124Q8NES8 71 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms