RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KCNK9Q9NPC2 374 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 ASNSD1Q9NWL6 643 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 GOLGA6L3A6NEY3 463 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 FFAR2O15552 330 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 VPS41P49754 854 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF84P51523 738 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 TNFAIP2Q03169 654 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 CNGA3Q16281 694 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 PFKFB4Q16877 469 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 MORN5Q5VZ52 161 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 C1orf228Q6PIY5 440 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 KRT27Q7Z3Y8 459 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF527Q8NB42 609 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM71BQ8TC56 605 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 POF1BQ8WVV4 589 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 TRMT61AQ96FX7 289 aaKnown RBP5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 FCRL5Q96RD9 977 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 MECRQ9BV79 373 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 C1QTNF7Q9BXJ2 289 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 HEMK1Q9Y5R4 338 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P49-201ENST00000418882 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A18PA6NE21 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A16PA6NEW6 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A9PA6NNJ1 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A5PA8MXJ8 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 KIF28PB7ZC32 967 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 INO80B-WBP1J3KQ70 363 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 TRIM38O00635 465 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A15PP0C7V4 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM90A14PP0C7W9 464 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 MATN1P21941 496 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 MMP8P22894 467 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 AKT1P31749 480 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 HOXD12P35452 270 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF81P51508 661 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 PNLIPRP1P54315 467 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 ALDH18A1P54886 795 aaKnown RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 PTK2BQ14289 1009 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 CSHL1Q14406 222 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 PUM3Q15397 648 aaKnown RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 TRIM71Q2Q1W2 868 aaKnown RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 BTBD16Q32M84 506 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 LAS2Q8IYD9 372 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 SAMD3Q8N6K7 520 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 CELF1Q92879 486 aaKnown RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 P2RY11Q96G91 374 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 EIF3CQ99613 913 aaKnown RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM118BQ9BPY3 351 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 RNF26Q9BY78 433 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 SLC29A3Q9BZD2 475 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 TP63Q9H3D4 680 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 TMEM184CQ9NVA4 438 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 MAGED2Q9UNF1 606 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 B3GNT3Q9Y2A9 372 aa5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 SIRT4Q9Y6E7 314 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P49-201ENST00000418882 SLC22A23A1A5C7 686 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 DSCR3O14972 297 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 RNF8O76064 485 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 PLAUP00749 431 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 ST6GAL1P15907 406 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 SOX2P48431 317 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 DMWDQ09019 674 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 BRD3Q15059 726 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 PFKFB3Q16875 520 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 AAK1Q2M2I8 961 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 TMEM63BQ5T3F8 832 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF425Q6IV72 752 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 TRABD2AQ86V40 505 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 ATG16L2Q8NAA4 619 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 ASB12Q8WXK4 309 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 GPR78Q96P69 363 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 SIGLEC11Q96RL6 698 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 NRIP3Q9NQ35 241 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 FBXO28Q9NVF7 368 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 ARL8BQ9NVJ2 186 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 LZTS1Q9Y250 596 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 UBE2J1Q9Y385 318 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P49-201ENST00000418882 C2CD4BA6NLJ0 364 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 SYT5O00445 386 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 ACKR2O00590 384 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 INPPL1O15357 1258 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 RFPL3SP0C7P2 107 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 CYP19A1P11511 503 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 TACR3P29371 465 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 FOXL2P58012 376 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 MORC3Q14149 939 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZACNQ401N2 412 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 C11orf87Q6NUJ2 197 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 RBM44Q6ZP01 1051 aaKnown RBP5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 EXD3Q8N9H8 876 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF845Q96IR2 970 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 KATNAL1Q9BW62 490 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 RAB21Q9UL25 225 aa5.1□□□□□ -1.59
HMGB1P49-201ENST00000418882 F5H423 210 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms