RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 UAP1L1Q3KQV9 507 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 FUT11Q495W5 492 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 PEAR1Q5VY43 1037 aaPredicted RBP14.84□□□□□ -0.03
NELFE-201ENST00000375425 KIAA1324Q6UXG2 1013 aaKnown RBP14.84□□□□□ -0.03
NELFE-201ENST00000375425 CLEC4CQ8WTT0 213 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 SORCS1Q8WY21 1168 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 IRGQQ8WZA9 623 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 KREMEN1Q96MU8 473 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 CIPCQ9C0C6 399 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 MKRN2Q9H000 416 aaKnown RBP14.84□□□□□ -0.03
NELFE-201ENST00000375425 NUP205Q92621 2012 aa14.84□□□□□ -0.03
NELFE-201ENST00000375425 GIPC1O14908 333 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 SYNCRIPO60506 623 aaKnown RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 LTFP02788 710 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 CFIP05156 583 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 ENGP17813 658 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 HOXD12P35452 270 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 NOVA1P51513 510 aaKnown RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 ZNF234Q14588 700 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 EIF4HQ15056 248 aaKnown RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 E2F5Q15329 346 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 CAMK4Q16566 473 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 DUOXA1Q1HG43 343 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 SH3PXD2AQ5TCZ1 1133 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 MSANTD2Q6P1R3 559 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 TMPRSS6Q8IU80 811 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 SLC41A1Q8IVJ1 513 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 SCUBE3Q8IX30 993 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 CEP76Q8TAP6 659 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 ZNF419Q96HQ0 510 aaPredicted RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 MIS12Q9H081 205 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 PRDM16Q9HAZ2 1276 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.03
NELFE-201ENST00000375425 KIAA1468Q9P260 1216 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 CNTN6Q9UQ52 1028 aa14.83□□□□□ -0.03
NELFE-201ENST00000375425 NDUFS2O75306 463 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 FBXO21O94952 628 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
NELFE-201ENST00000375425 LATS1O95835 1130 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 NCAM1P13591 858 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 KRT5P13647 590 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 PMLP29590 882 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 HLA-FP30511 346 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 GPD2P43304 727 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 MAPK8P45983 427 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 ZNF445P59923 1031 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 ARID5AQ03989 594 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 METTL3Q86U44 580 aaKnown RBP14.83□□□□□ -0.04
NELFE-201ENST00000375425 CREBRFQ8IUR6 639 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 GOLGA1Q92805 767 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 HSPA12BQ96MM6 686 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 FSCN3Q9NQT6 498 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 ITM2CQ9NQX7 267 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 WDFY3Q8IZQ1 3526 aa14.83□□□□□ -0.04
NELFE-201ENST00000375425 ACACBO00763 2458 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 ZFHX4Q86UP3 3567 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 GOLGA6L7A0A1B0GV03 622 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 IGLV3-27P01718 113 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 FYNP06241 537 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 EPHX1P07099 455 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 SERPINF2P08697 491 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 CD6P30203 668 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 SGSHP51688 502 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 TBX4P57082 545 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 UBE2HP62256 183 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 NUGGCQ68CJ6 796 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 RFWD3Q6PCD5 774 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 RGL4Q8IZJ4 473 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 SIPA1Q96FS4 1042 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 ST7Q9NRC1 585 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 RWDD2AQ9UIY3 292 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 ANGPTL2Q9UKU9 493 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 PLA2G4CQ9UP65 541 aa14.82□□□□□ -0.04
NELFE-201ENST00000375425 SPEGQ15772 3267 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 KCNJ18B7U540 433 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 CEACAM1P13688 526 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 PRKCHP24723 683 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 RPL34P49207 117 aaKnown RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 SLC11A2P49281 568 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 COPAP53621 1224 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 GFPT1Q06210 699 aaPredicted RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 FAM133BQ5BKY9 247 aaKnown RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 PIK3R6Q5UE93 754 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 DENND1BQ6P3S1 775 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 SERPINA13PQ6UXR4 307 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 RABEPKQ7Z6M1 372 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 CYB5D2Q8WUJ1 264 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 ZNF606Q8WXB4 792 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 PRCCQ92733 491 aaPredicted RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 FOXJ1Q92949 421 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 TOE1Q96GM8 510 aaKnown RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 MED15Q96RN5 788 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 GTPBP2Q9BX10 602 aaKnown RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 CAPN10Q9HC96 672 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms