RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 VIL1P09327 827 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 PARP1P09874 1014 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 TMIGD3P0DMS9 266 aaPredicted RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 FCGR1AP12314 374 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 HSD3B2P26439 372 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 KLRC1P26715 233 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 GALNSP34059 522 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 IDUAP35475 653 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 NOVP48745 357 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 GLUD2P49448 558 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 VPS41P49754 854 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PDLIM4P50479 330 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PGDP52209 483 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 DLX5P56178 289 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 SEC61A1P61619 476 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 WDR5P61964 334 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 FMO1Q01740 532 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ITKQ08881 620 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 Q0VFX4 171 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 SLC13A2Q13183 592 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 DNASE1L3Q13609 305 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 RAB32Q13637 225 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 FGL2Q14314 439 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 KCNJ12Q14500 433 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ZRSR1Q15695 479 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 CCDC6Q16204 474 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PTPN21Q16825 1174 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ST3GAL2Q16842 350 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ABCB5Q2M3G0 1257 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 KIF19Q2TAC6 998 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 Q5PR19 223 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 C6orf10Q5SRN2 563 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CACHD1Q5VU97 1274 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 TTLL5Q6EMB2 1281 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ISM2Q6H9L7 571 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 WBP2NLQ6ICG8 309 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ZDHHC24Q6UX98 284 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ZNF783Q6ZMS7 281 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 Q6ZTK2 550 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ARMC9Q7Z3E5 817 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 KCTD20Q7Z5Y7 419 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CTU1Q7Z7A3 348 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 DAAM2Q86T65 1068 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CHPFQ8IZ52 775 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CELF5Q8N6W0 485 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 C11orf44Q8N8P7 122 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 ARL14EPQ8N8R7 260 aaPredicted RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 C7orf57Q8NEG2 295 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 OR6B3Q8NGW1 331 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CELF1Q92879 486 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 RTP4Q96DX8 246 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 URB1-AS1Q96HZ7 61 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 MRGPRX1Q96LB2 322 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 NODALQ96S42 347 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 PPP1R9BQ96SB3 815 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 P2RX7Q99572 595 aaKnown RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 TTLL2Q9BWV7 592 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 DCLK3Q9C098 648 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CCDC8Q9H0W5 538 aaPredicted RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 PLAC1Q9HBJ0 212 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 VPS45Q9NRW7 570 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 DNAJB11Q9UBS4 358 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 UTS2RQ9UKP6 389 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 TRHDEQ9UKU6 1024 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 VPS4AQ9UN37 437 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 MAGED2Q9UNF1 606 aaPredicted RBP1.03□□□□□ -2.24
COPB1-212ENST00000534771 SNED1Q8TER0 1413 aa1.03□□□□□ -2.24
COPB1-212ENST00000534771 TRIP12Q14669 1992 aaPredicted RBP1.03□□□□□ -2.25
COPB1-212ENST00000534771 A0A088AWK7 358 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 LOC102723971A0A1B0GUV8 181 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 A0A1B0GVT2 93 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 TLDC2A0PJX2 215 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 TMEM233B4DJY2 109 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 BMPR1BO00238 502 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SLC16A5O15375 505 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CCP110O43303 1012 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 ZRANB2O95218 330 aaKnown RBP eCLIP1.02□□□□□ -2.251e-7■■□□□ 13.1
COPB1-212ENST00000534771 MBPP02686 304 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 F7P08709 466 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 TMEM225BP0DP42 221 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 HGFP14210 728 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 AKR1A1P14550 325 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 DUSP1P28562 367 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CIITAP33076 1130 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 HOXD12P35452 270 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SOX2P48431 317 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 RASSF2P50749 326 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CLCN5P51795 746 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 AGFG1P52594 562 aaKnown RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 CRIP2P52943 208 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 ARFIP2P53365 341 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 ITGA8P53708 1063 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 EIF4A1P60842 406 aaKnown RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 ABATP80404 500 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 KIF5AQ12840 1032 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 MTMR1Q13613 665 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CNGA3Q16281 694 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SPATA31A5Q5VU36 1347 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 OTUD1Q5VV17 481 aaPredicted RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms