RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 SYT15Q9BQS2 421 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 TXNDC16Q9P2K2 825 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 L3MBTL1Q9Y468 752 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 CFAP69A5D8W1 941 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 PTGESO14684 152 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 ELNP15502 786 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 PTPRN2Q92932 1015 aa16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 EMID1Q96A84 441 aaPredicted RBP16.47■□□□□ 0.23
ATP2C1-224ENST00000533801 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM72CH0Y354 149 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 RNF103O00237 685 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 THP07101 528 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 OR4Q2P0C623 313 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 NPR3P17342 541 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 MGAT1P26572 445 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 CPA2P48052 419 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 TMPRSS15P98073 1019 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 MGAT5Q09328 741 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 ITIH4Q14624 930 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 UBXN11Q5T124 520 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM72AQ5TYM5 149 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM72DQ6L9T8 149 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 YTHDF3Q7Z739 585 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 FAM72BQ86X60 149 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 RNF139Q8WU17 664 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 PRDM12Q9H4Q4 367 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 PIGVQ9NUD9 493 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 SMG5Q9UPR3 1016 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 H0Y3Z8 333 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 ALDH3A1P30838 453 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 RGS2P41220 211 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 PDE1BQ01064 536 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 NR1H3Q13133 447 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 ACAP1Q15027 740 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 MTFR1Q15390 333 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 OTOAQ7RTW8 1153 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 MTDHQ86UE4 582 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 NDUFAF2Q8N183 169 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 KCNN1Q92952 543 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 UNKQ9C0B0 810 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 CNTN3Q9P232 1028 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 TTC3P53804 2025 aa16.46■□□□□ 0.23
ATP2C1-224ENST00000533801 NEBLO76041 1014 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 PGGT1BP53609 377 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 GDF6Q6KF10 455 aaPredicted RBP16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 NT5DC4Q86YG4 428 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 CNPY4Q8N129 248 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 RIBC1Q8N443 379 aaPredicted RBP16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 HTR3CQ8WXA8 447 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 PCED1BQ96HM7 432 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 SLC24A2Q9UI40 661 aa16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.22
ATP2C1-224ENST00000533801 PIRO00625 290 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 PTPN7P35236 360 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 TPI1P60174 286 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 CRHR2Q13324 411 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 RCN2Q14257 317 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 EFHC1Q5JVL4 640 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 KIAA0319Q5VV43 1072 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 UNC5AQ6ZN44 842 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 RFWD2Q8NHY2 731 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 DCAKDQ8WVC6 231 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 MANSC1Q9H8J5 431 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 STAP1Q9ULZ2 295 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 CSH1P0DML2 217 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 CSH2P0DML3 217 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 GNAT1P11488 350 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 VAV1P15498 845 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 EPHB2P29323 1055 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 SLC45A4Q5BKX6 768 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 ANKRD20A2Q5SQ80 823 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 ANKRD20A1Q5TYW2 823 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 ANKRD20A3Q5VUR7 823 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 CDHR3Q6ZTQ4 885 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 UNC93AQ86WB7 457 aa16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 AGO3Q9H9G7 860 aaKnown RBP16.45■□□□□ 0.22
ATP2C1-224ENST00000533801 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 DFFAO00273 331 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 MATKP42679 507 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 KCNJ11Q14654 390 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 ZBTB6Q15916 424 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 CLEC20AQ6ZU45 233 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 SLC26A9Q7LBE3 791 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 CAND1Q86VP6 1230 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 SPC25Q9HBM1 224 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 ARHGEF4Q9NR80 690 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 ARMCX1Q9P291 453 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 EFR3BQ9Y2G0 817 aa16.44■□□□□ 0.22
ATP2C1-224ENST00000533801 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms