RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MSANTD2Q6P1R3 559 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 DENND1BQ6P3S1 775 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 TRIM65Q6PJ69 517 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 CPXM2Q8N436 756 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 PIWIL1Q96J94 861 aaKnown RBP17.83■□□□□ 0.44
BRCC3-202ENST00000340647 UBE2TQ9NPD8 197 aaPredicted RBP17.83■□□□□ 0.44
BRCC3-202ENST00000340647 STOML2Q9UJZ1 356 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 SLC27A6Q9Y2P4 619 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 CFAP47Q6ZTR5 3102 aa17.83■□□□□ 0.44
BRCC3-202ENST00000340647 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.82■□□□□ 0.44
BRCC3-202ENST00000340647 TM4SF5O14894 197 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 IGLV3-27P01718 113 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 SDHBP21912 280 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 DGKGP49619 791 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 SGSHP51688 502 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 SLC8A3P57103 927 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 TCEAL6Q6IPX3 200 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 TCEAL3Q969E4 200 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 PLD4Q96BZ4 506 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 ERLEC1Q96DZ1 483 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 HSFY1Q96LI6 401 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 XPO6Q96QU8 1125 aaKnown RBP17.82■□□□□ 0.44
BRCC3-202ENST00000340647 GABRG3Q99928 467 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 CD93Q9NPY3 652 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 LMBRD1Q9NUN5 540 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 CDV3Q9UKY7 258 aaKnown RBP17.82■□□□□ 0.44
BRCC3-202ENST00000340647 ZNF510Q9Y2H8 683 aa17.82■□□□□ 0.44
BRCC3-202ENST00000340647 CNOT1A5YKK6 2376 aaKnown RBP17.81■□□□□ 0.44
BRCC3-202ENST00000340647 TCRBV21S2A2A0A5A6 115 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 BCLAF3A2AJT9 711 aaKnown RBP17.81■□□□□ 0.44
BRCC3-202ENST00000340647 PON1P27169 355 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 NTSR1P30989 418 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 MPLP40238 635 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 CETN1Q12798 172 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 ENPP2Q13822 863 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 MIIPQ5JXC2 388 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 RSRC2Q7L4I2 434 aaKnown RBP17.81■□□□□ 0.44
BRCC3-202ENST00000340647 SIX6OS1Q8N1H7 587 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 WDTC1Q8N5D0 677 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 HMGB4Q8WW32 186 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 ZNF606Q8WXB4 792 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 MYEOVQ96EZ4 313 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
BRCC3-202ENST00000340647 DCLK3Q9C098 648 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 SLC6A17Q9H1V8 727 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 ABCC13Q9NSE7 274 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 HBS1LQ9Y450 684 aaKnown RBP17.81■□□□□ 0.44
BRCC3-202ENST00000340647 PCDHGA5Q9Y5G8 931 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 RAD54BQ9Y620 910 aa17.81■□□□□ 0.44
BRCC3-202ENST00000340647 SLC30A4O14863 429 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 HOXD9P28356 352 aaPredicted RBP17.8■□□□□ 0.44
BRCC3-202ENST00000340647 CHKAP35790 457 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 STILQ15468 1287 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 USP39Q53GS9 565 aaKnown RBP17.8■□□□□ 0.44
BRCC3-202ENST00000340647 RNF43Q68DV7 783 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 SCUBE3Q8IX30 993 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 IRGQQ8WZA9 623 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 RTKNQ9BST9 563 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 SLC4A5Q9BY07 1137 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 OLA1Q9NTK5 396 aaKnown RBP17.8■□□□□ 0.44
BRCC3-202ENST00000340647 CACNA2D2Q9NY47 1150 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 STRIP2Q9ULQ0 834 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 MAP1BP46821 2468 aaKnown RBP17.8■□□□□ 0.44
BRCC3-202ENST00000340647 CHD8Q9HCK8 2581 aa17.8■□□□□ 0.44
BRCC3-202ENST00000340647 PAPSS1O43252 624 aaPredicted RBP17.79■□□□□ 0.44
BRCC3-202ENST00000340647 LTFP02788 710 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 HOXB2P14652 356 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 SLC6A4P31645 630 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 KCNMA1Q12791 1236 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 NUMA1Q14980 2115 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 FAM133BQ5BKY9 247 aaKnown RBP17.79■□□□□ 0.44
BRCC3-202ENST00000340647 SYPL2Q5VXT5 272 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 NADSYN1Q6IA69 706 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 WFDC5Q8TCV5 224 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 IPO4Q8TEX9 1081 aaKnown RBP17.79■□□□□ 0.44
BRCC3-202ENST00000340647 SHC3Q92529 594 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 MIS12Q9H081 205 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 POLMQ9NP87 494 aaPredicted RBP17.79■□□□□ 0.44
BRCC3-202ENST00000340647 PCDH15Q96QU1 1955 aa17.79■□□□□ 0.44
BRCC3-202ENST00000340647 ASCC3Q8N3C0 2202 aaKnown RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 GOLGA6L7A0A1B0GV03 622 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 PATE3B3GLJ2 98 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 TSPAN3O60637 253 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 LETM1O95202 739 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 FGFR1OPO95684 399 aaKnown RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 KRT5P13647 590 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 NDUFV2P19404 249 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 GBP1P32455 592 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 IL12RB1P42701 662 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 PTGER3P43115 390 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 PITX1P78337 314 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 EIF4EBP2Q13542 120 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 PREPLQ4J6C6 727 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 KIAA0907Q7Z7F0 614 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 SORCS1Q8WY21 1168 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms