RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 ATP6V1C1P21283 382 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 HDAC4P56524 1084 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 KCTD2Q14681 263 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 ATG16L1Q676U5 607 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 USP50Q70EL3 339 aaPredicted RBP18.3■□□□□ 0.52
GYPC-202ENST00000356887 NT5DC4Q86YG4 428 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 SULF1Q8IWU6 871 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 SCUBE3Q8IX30 993 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 ARMC2Q8NEN0 867 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 E2F7Q96AV8 911 aa18.3■□□□□ 0.52
GYPC-202ENST00000356887 EBNA1BP2Q99848 306 aaKnown RBP18.3■□□□□ 0.52
GYPC-202ENST00000356887 MMADHCQ9H3L0 296 aaPredicted RBP18.3■□□□□ 0.52
GYPC-202ENST00000356887 HMX2A2RU54 273 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 KRT38O76015 456 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 SETSIPP0DME0 302 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 TPSB2P20231 275 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 PAX7P23759 505 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 CYP2F1P24903 491 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 OCRLQ01968 901 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 BMPR2Q13873 1038 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 TTLL4Q14679 1199 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 TPSAB1Q15661 275 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 APBB1IPQ7Z5R6 666 aaPredicted RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 ALYREFQ86V81 257 aaKnown RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 VPS52Q8N1B4 723 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 GSDMBQ8TAX9 411 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 SLC35F5Q8WV83 523 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 SLC13A1Q9BZW2 595 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 NMUR2Q9GZQ4 415 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 ARHGEF4Q9NR80 690 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 CORO1CQ9ULV4 474 aaPredicted RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 AKT3Q9Y243 479 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 MCM3APO60318 1980 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 PAPPA2Q9BXP8 1791 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 PAPSS1O43252 624 aaPredicted RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 L1CAMP32004 1257 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 CDK18Q07002 472 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 SLC10A2Q12908 348 aaPredicted RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 KPNB1Q14974 876 aaKnown RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 TEX44Q53QW1 395 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 TRMT10BQ6PF06 316 aaKnown RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 ACOT1Q86TX2 421 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 SESTD1Q86VW0 696 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 MPP5Q8N3R9 675 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
GYPC-202ENST00000356887 FAM167BQ9BTA0 163 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 STOML1Q9UBI4 398 aa18.29■□□□□ 0.52
GYPC-202ENST00000356887 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 A6NHS1 94 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 CAPN14A8MX76 684 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 VTNP04004 478 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 CRHR1P34998 444 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 ARHGAP1Q07960 439 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 CHI3L2Q15782 390 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 ACSBG2Q5FVE4 666 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 PPP6R3Q5H9R7 873 aaPredicted RBP18.28■□□□□ 0.52
GYPC-202ENST00000356887 NUDCD3Q8IVD9 361 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 RAB3IL1Q8TBN0 382 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 MCUR1Q96AQ8 359 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 TRIM56Q9BRZ2 755 aaKnown RBP18.28■□□□□ 0.52
GYPC-202ENST00000356887 ELP3Q9H9T3 547 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 ARMCX1Q9P291 453 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 PCDHA11Q9Y5I1 949 aa18.28■□□□□ 0.52
GYPC-202ENST00000356887 CYB561D2O14569 222 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 TSPAN1O60635 241 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 LGALS2P05162 132 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 ACADSP16219 412 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 TFE3P19532 575 aaPredicted RBP18.27■□□□□ 0.52
GYPC-202ENST00000356887 INHBEP58166 350 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 GBE1Q04446 702 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 DPYSL2Q16555 572 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 TRIM68Q6AZZ1 485 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 ANO7Q6IWH7 933 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 DNAJC9Q8WXX5 260 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.52
GYPC-202ENST00000356887 ZNF395Q9H8N7 513 aaPredicted RBP18.27■□□□□ 0.52
GYPC-202ENST00000356887 ETAA1Q9NY74 926 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 NME7Q9Y5B8 376 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 MAD1L1Q9Y6D9 718 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 KAT6AQ92794 2004 aa18.27■□□□□ 0.52
GYPC-202ENST00000356887 BIRC5O15392 142 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 SNNO75324 88 aaPredicted RBP18.27■□□□□ 0.51
GYPC-202ENST00000356887 TOMM70O94826 608 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 ZFXP17010 805 aaPredicted RBP18.27■□□□□ 0.51
GYPC-202ENST00000356887 PTPN9P43378 593 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 SERPINB9P50453 376 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 RCN1Q15293 331 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 TIFABQ6ZNK6 161 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 NDUFAF2Q8N183 169 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 CENPIQ92674 756 aaPredicted RBP18.27■□□□□ 0.51
GYPC-202ENST00000356887 OTUD5Q96G74 571 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 C11orf84Q9BUA3 381 aaPredicted RBP18.27■□□□□ 0.51
GYPC-202ENST00000356887 B3GNT5Q9BYG0 378 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.51
GYPC-202ENST00000356887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.27■□□□□ 0.51
GYPC-202ENST00000356887 IQCA1LA6NCM1 817 aa18.26■□□□□ 0.51
GYPC-202ENST00000356887 KRT36O76013 467 aa18.26■□□□□ 0.51
GYPC-202ENST00000356887 PSMG1O95456 288 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms