RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MICAL1Q8TDZ2 1067 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 KIF12Q96FN5 646 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 TRIM6Q9C030 488 aaPredicted RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.78■□□□□ 0.122e-10■□□□□ 9.7
DDX56-201ENST00000258772 MAD1L1Q9Y6D9 718 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 ZNF487B1APH4 448 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 TFE3P19532 575 aaPredicted RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 TPSB2P20231 275 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 L1CAMP32004 1257 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 GCKP35557 465 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 GBE1Q04446 702 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 TPSAB1Q15661 275 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 ARID3BQ8IVW6 561 aaPredicted RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 MPP5Q8N3R9 675 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 AFG1LQ8WV93 481 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 MRPL45Q9BRJ2 306 aaKnown RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 ZNF395Q9H8N7 513 aaPredicted RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 ELP3Q9H9T3 547 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 ARHGEF4Q9NR80 690 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 FAM49BQ9NUQ9 324 aa15.78■□□□□ 0.12
DDX56-201ENST00000258772 CORO1CQ9ULV4 474 aaPredicted RBP15.78■□□□□ 0.12
DDX56-201ENST00000258772 CAPN14A8MX76 684 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 LGALS2P05162 132 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 SETSIPP0DME0 302 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 CHRM1P11229 460 aaPredicted RBP15.77■□□□□ 0.12
DDX56-201ENST00000258772 DESP17661 470 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 CRHR1P34998 444 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 TEX44Q53QW1 395 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 MROH9Q5TGP6 573 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 ANO7Q6IWH7 933 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 SESTD1Q86VW0 696 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 NDUFAF2Q8N183 169 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 DNAJC9Q8WXX5 260 aa15.77■□□□□ 0.12
DDX56-201ENST00000258772 TSPAN1O60635 241 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 SKAP2O75563 359 aaPredicted RBP15.77■□□□□ 0.11
DDX56-201ENST00000258772 RCN1Q15293 331 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 CCDC6Q16204 474 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 DPYSL2Q16555 572 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 TSNAXIP1Q2TAA8 658 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 GJC2Q5T442 439 aaPredicted RBP15.77■□□□□ 0.11
DDX56-201ENST00000258772 WDR60Q8WVS4 1066 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 SPDL1Q96EA4 605 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 DHX35Q9H5Z1 703 aaKnown RBP15.77■□□□□ 0.11
DDX56-201ENST00000258772 PCMTD2Q9NV79 361 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 NME7Q9Y5B8 376 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 PCDHA11Q9Y5I1 949 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 SNX9Q9Y5X1 595 aa15.77■□□□□ 0.11
DDX56-201ENST00000258772 OTOFQ9HC10 1997 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 A6NHS1 94 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 B2RBV5 119 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 KRT36O76013 467 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 ACADSP16219 412 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 GRIA1P42261 906 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 NR2C2P49116 596 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 SERPINB9P50453 376 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 SESN3P58005 492 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CAPRIN2Q6IMN6 1127 aaKnown RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 KCNT2Q6UVM3 1135 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 TREML1Q86YW5 311 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 SMC1BQ8NDV3 1235 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 RAB3IL1Q8TBN0 382 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 C20orf27Q9GZN8 174 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 HESX1Q9UBX0 185 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CCDC195A0A1B0GUA6 201 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 A6NJR5 290 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 SNNO75324 88 aaPredicted RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 PSMG1O95456 288 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 BPGMP07738 259 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 ZFXP17010 805 aaPredicted RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 PGM1P36871 562 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 VHLP40337 213 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 PTPN9P43378 593 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CPA2P48052 419 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 SNX16P57768 344 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CDK18Q07002 472 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 SNX30Q5VWJ9 437 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 TMPRSS6Q8IU80 811 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 ZDHHC17Q8IUH5 632 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CRLF3Q8IUI8 442 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 NLRP7Q8WX94 980 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CENPIQ92674 756 aaPredicted RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 ZNF333Q96JL9 665 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 OSBPL1AQ9BXW6 950 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 WWP1Q9H0M0 922 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 XAB2Q9HCS7 855 aaKnown RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 NMRK1Q9NWW6 199 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 MTMR10Q9NXD2 777 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 MOCS1Q9NZB8 636 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 PPARGC1AQ9UBK2 798 aaKnown RBP15.76■□□□□ 0.11
DDX56-201ENST00000258772 PLXNA1Q9UIW2 1896 aa15.76■□□□□ 0.11
DDX56-201ENST00000258772 CXCL11O14625 94 aa15.75■□□□□ 0.11
DDX56-201ENST00000258772 NVLO15381 856 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms