RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SIKE1Q9BRV8 207 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 FAM213AQ9BRX8 229 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 MRPL1Q9BYD6 325 aaKnown RBP18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 APPL1Q9UKG1 709 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 RAB26Q9ULW5 256 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF232Q9UNY5 417 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 DNAJC16Q9Y2G8 782 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 MYOCOSA0A1B0GUC4 107 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 QARSP47897 775 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 GK3PQ14409 553 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 CNGA3Q16281 694 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 GPR162Q16538 588 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 ARCQ7LC44 396 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 TRMT1LQ7Z2T5 733 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF410Q86VK4 478 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 PHF12Q96QT6 1004 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 SLC38A10Q9HBR0 1119 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 C6orf203Q9P0P8 240 aaPredicted RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 PSMD13Q9UNM6 376 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 APOBEC2Q9Y235 224 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 EFR3BQ9Y2G0 817 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 SH3GLB1Q9Y371 365 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 AP4B1Q9Y6B7 739 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 ITGB5P18084 799 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 YY1P25490 414 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 PIGHQ14442 188 aaPredicted RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 SYCP2LQ5T4T6 812 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 KLHL35Q6PF15 583 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 DDI1Q8WTU0 396 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 CNBD2Q96M20 576 aa18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 STN1Q9H668 368 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 APOBEC3GQ9HC16 384 aaKnown RBP18.28■□□□□ 0.52
CDKN1B-201ENST00000228872 TMEM221A6NGB7 291 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 GLTPD2A6NH11 291 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 ADM5C9JUS6 153 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 ADCY3O60266 1144 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 AVILO75366 819 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 LYPLA1O75608 230 aaPredicted RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 SRGAP2CP0DJJ0 459 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 SRGAP2BP0DMP2 458 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 EPHX2P34913 555 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 LGSNQ5TDP6 509 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 PAOXQ6QHF9 649 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 TRIM67Q6ZTA4 783 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 RNF168Q8IYW5 571 aaPredicted RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 GFM2Q969S9 779 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 MMP19Q99542 508 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 PRPF18Q99633 342 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 ITM2AO43736 263 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 UGT1A9O60656 530 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 TOM1L1O75674 476 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 PPIDQ08752 370 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 KCNJ11Q14654 390 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 SMTNL2Q2TAL5 461 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 ZACNQ401N2 412 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 TDRD10Q5VZ19 366 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 IYDQ6PHW0 289 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 FNDC8Q8TC99 324 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 TFB1MQ8WVM0 346 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 PRPF31Q8WWY3 499 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 APBB2Q92870 758 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 HSPBAP1Q96EW2 488 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 UGT1A7Q9HAW7 530 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 UGT1A10Q9HAW8 530 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 UGT1A8Q9HAW9 530 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 CEPT1Q9Y6K0 416 aa18.27■□□□□ 0.52
CDKN1B-201ENST00000228872 NFIBO00712 420 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 LYPLA2O95372 231 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 CALB1P05937 261 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 CRHR1P34998 444 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 HDAC4P56524 1084 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 EIF3EP60228 445 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 GHRHRQ02643 423 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 ENPEPQ07075 957 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 PEX6Q13608 980 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 LPIN1Q14693 890 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 NDUFAF2Q8N183 169 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 PPP1R14CQ8TAE6 165 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 SMYD2Q9NRG4 433 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 THEGQ9P2T0 379 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 H3BSA7 217 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 DHX15O43143 795 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 SUPT3HO75486 399 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 ABCD1P33897 745 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 MTTPP55157 894 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 COG7P83436 770 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 UGCGQ16739 394 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 LRRC8BQ6P9F7 803 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 NIPA2Q8N8Q9 360 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 KMT5AQ9NQR1 393 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 LOC285556D6RIA3 1793 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms