RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM168Q9H0V1 697 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 LDAHQ9H6V9 325 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 DLL3Q9NYJ7 618 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAP3K20Q9NYL2 800 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 TRMT112Q9UI30 125 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 FBXO2Q9UK22 296 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC13A4Q9UKG4 626 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ITGB1BP2Q9UKP3 347 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAN2B2Q9Y2E5 1009 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ACTL7AQ9Y615 435 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 IGF2RP11717 2491 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF521Q96K83 1311 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 C2orf78A6NCI8 922 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 H3BQ06 376 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 NPC1O15118 1278 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 CYP1A1P04798 512 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 TXNP10599 105 aaKnown RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 HDCP19113 662 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 BDNFP23560 247 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 IL1R2P27930 398 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 COPAP53621 1224 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 WNT3P56703 355 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 GEMIN4P57678 1058 aaKnown RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 EFR3AQ14156 821 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 RTP5Q14D33 572 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 PRR31Q5SQ13 230 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ANKRD45Q5TZF3 282 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 AFMIDQ63HM1 303 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 LVRNQ6Q4G3 990 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 RSRC2Q7L4I2 434 aaKnown RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 STK32CQ86UX6 486 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADHFE1Q8IWW8 467 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ABI1Q8IZP0 508 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 CLASRPQ8N2M8 674 aaKnown RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 LILRA3Q8N6C8 439 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ATG16L2Q8NAA4 619 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 LPAR1Q92633 364 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 SCAMP4Q969E2 229 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 SPSB4Q96A44 273 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 EID2BQ96D98 161 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 UBXN10Q96LJ8 280 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 C1orf43Q9BWL3 253 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZCWPW1Q9H0M4 648 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAGEH1Q9H213 219 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 SMURF2Q9HAU4 748 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 GPR35Q9HC97 309 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 SAYSD1Q9NPB0 183 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLAMF7Q9NQ25 335 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 HEYLQ9NQ87 328 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 RASSF1Q9NS23 344 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 RRN3Q9NYV6 651 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 NTMQ9P121 344 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 CA14Q9ULX7 337 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 TMEM98Q9Y2Y6 226 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 TMX2Q9Y320 296 aa5.35□□□□□ -1.55
HMGB1P23-201ENST00000518743 ARAP2Q8WZ64 1704 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 COL4A4P53420 1690 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 ITIH6Q6UXX5 1313 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 SH3TC1Q8TE82 1336 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 A0A087WWL8 130 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 EPOPA6NHQ4 379 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 EIF4E1BA6NMX2 242 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 ACKR2O00590 384 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 KIAA0355O15063 1070 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 CCP110O43303 1012 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 RASSF9O75901 435 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 KRT38O76015 456 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 GLP2RO95838 553 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 CA3P07451 260 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 JUNBP17275 347 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 ALDH1A3P47895 512 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADCY7P51828 1080 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 NCKAP1LP55160 1127 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 RPS8P62241 208 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 INSCQ1MX18 579 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 TANGO2Q6ICL3 276 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 UNC13DQ70J99 1090 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 CBLL1Q75N03 491 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 FASTKD5Q7L8L6 764 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 IGDCC3Q8IVU1 814 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 MPP5Q8N3R9 675 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 NME8Q8N427 588 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 TMEM199Q8N511 208 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 VGLL2Q8N8G2 317 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 MDM1Q8TC05 714 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 RABGGTAQ92696 567 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 PRMT6Q96LA8 375 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPP1R9BQ96SB3 815 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 MRI1Q9BV20 369 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 DHX36Q9H2U1 1008 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 ALG13Q9NP73 1137 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 OBP2BQ9NPH6 170 aa5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 RUVBL1Q9Y265 456 aaKnown RBP5.34□□□□□ -1.55
HMGB1P23-201ENST00000518743 SIPA1L3O60292 1781 aaPredicted RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms