RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SPATA17Q96L03 361 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 JAKMIP1Q96N16 626 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 PPP1R10Q96QC0 940 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 EYA3Q99504 573 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TLR10Q9BXR5 811 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 INTS2Q9H0H0 1204 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SIL1Q9H173 461 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SLC6A17Q9H1V8 727 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 CHORDC1Q9UHD1 332 aaPredicted RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SARDHQ9UL12 918 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 PCDHGB5Q9Y5G0 923 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 GOLGA6L10A0A0M3HER8 536 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 A0A1W2PQM1 296 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 GAGE10A6NGK3 116 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 LIPT2A6NK58 231 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 TBKBP1A7MCY6 615 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 TSPAN4O14817 238 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 ADAM20O43506 726 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 LMNAP02545 664 aaKnown RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 TBXAS1P24557 533 aaPredicted RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 NTSR1P30989 418 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 ICAM3P32942 547 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PNPLA4P41247 253 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 GPD2P43304 727 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PPP5CP53041 499 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 LOXL3P58215 753 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM3BP58499 235 aaPredicted RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 RAP2BP61225 183 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 LRRC24Q50LG9 513 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 ZNF766Q5HY98 468 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 DEPDC1Q5TB30 811 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 TAF2Q6P1X5 1199 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 INTS5Q6P9B9 1019 aaKnown RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 CYP20A1Q6UW02 462 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 MFSD6Q6ZSS7 791 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM47EQ6ZV65 393 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PTGR2Q8N8N7 351 aaPredicted RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 FSIP1Q8NA03 581 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 AVL9Q8NBF6 648 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PSD4Q8NDX1 1056 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 FNIP1Q8TF40 1166 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 ATRIPQ8WXE1 791 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PPP2R3CQ969Q6 453 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 AJUBAQ96IF1 538 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 LRIG1Q96JA1 1093 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 NOX5Q96PH1 765 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 NCAPGQ9BPX3 1015 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 GPATCH1Q9BRR8 931 aaKnown RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 DBNDD1Q9H9R9 158 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PDE7BQ9NP56 450 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 KCNK9Q9NPC2 374 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 SLCO3A1Q9UIG8 710 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM184BQ9ULE4 1060 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 USP22Q9UPT9 525 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 PCDHA5Q9Y5H7 936 aa5.74□□□□□ -1.49
TM9SF3-202ENST00000443638 GTPBP10A4D1E9 387 aaKnown RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TRIM64A6NGJ6 449 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TRIM64BA6NI03 449 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 CLGNO14967 610 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 SLC7A4O43246 635 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 CTIFO43310 598 aaKnown RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 RGS10O43665 173 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 KRT1P04264 644 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 CSF1RP07333 972 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 FCER1AP12319 257 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 ACP5P13686 325 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 PSMA3P25788 255 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 RBL1P28749 1068 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 EIF2DP41214 584 aaKnown RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TNNT3P45378 269 aaPredicted RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 GCLCP48506 637 aaPredicted RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 PGDP52209 483 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 RAD23AP54725 363 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 PSMC6P62333 389 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 WASHC5Q12768 1159 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 LRMPQ12912 555 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 PPP2R5CQ13362 524 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TDGQ13569 410 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 ACOX1Q15067 660 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TMEM266Q2M3C6 531 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 C1orf141Q5JVX7 400 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 ARTNQ5T4W7 220 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 KAZNQ674X7 775 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 OLFML2BQ68BL8 750 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 KRT40Q6A162 431 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 IL27RAQ6UWB1 636 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 Q6ZUG5 572 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 GPRIN1Q7Z2K8 1008 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 CCDC105Q8IYK2 499 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 TAGAPQ8N103 731 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 POC1BQ8TC44 478 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 MASTLQ96GX5 879 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 ZNF764Q96H86 408 aaPredicted RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 RPL10LQ96L21 214 aaKnown RBP5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 HIST1H2AAQ96QV6 131 aa5.73□□□□□ -1.49
TM9SF3-202ENST00000443638 CARD11Q9BXL7 1154 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms