RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CAPN14A8MX76 684 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 B4E171 279 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 F8W810 466 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 STMND1H3BQB6 276 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 GOLGA8MH3BSY2 632 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 AP3D1O14617 1153 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KPNA5O15131 536 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KMOO15229 486 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NPHS1O60500 1241 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 B4GALT3O60512 393 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SRGAP2O75044 1071 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 CLN5O75503 358 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 LARGE1O95461 756 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 APOA4P06727 396 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 HEXBP07686 556 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ABCB1P08183 1280 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ALOX5P09917 674 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NAGAP17050 411 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KRT4P19013 534 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 TBXAS1P24557 533 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ACAT1P24752 427 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 LSP1P33241 339 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 PPARGP37231 505 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ALDH5A1P51649 535 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 HMGA2P52926 109 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ITGA1P56199 1179 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAP3K7CLP57077 242 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MYL6P60660 151 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 CSNK2BP67870 215 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NOP14P78316 857 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KRT85P78386 507 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KDSRQ06136 332 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SULT2A1Q06520 285 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPAG1Q07617 926 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 FOXO1Q12778 655 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ADAM15Q13444 863 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MTMR1Q13613 665 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 DOC2AQ14183 400 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 E2F2Q14209 437 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 GALEQ14376 348 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 KCNB1Q14721 858 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ODF1Q14990 250 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 PTPAQ15257 358 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 CEP85LQ5SZL2 805 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 GRTP1Q5TC63 336 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ATL3Q6DD88 541 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 CD300LDQ6UXZ3 194 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ETV3LQ6ZN32 361 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 USP50Q70EL3 339 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 GPR142Q7Z601 462 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 COMTD1Q86VU5 262 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ARL14Q8N4G2 192 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 AFAP1L2Q8N4X5 818 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZBTB38Q8NAP3 1195 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ENKURQ8TC29 256 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 AGR3Q8TD06 166 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 LMBR1Q8WVP7 490 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPDL1Q96EA4 605 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MFSD3Q96ES6 412 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MED30Q96HR3 178 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 C7orf34Q96L11 122 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM20AQ96MK3 541 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NT5C1BQ96P26 610 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 YME1L1Q96TA2 773 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SMAD5Q99717 465 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 TREX2Q9BQ50 279 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 MRIQ9BWK5 157 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NUSAP1Q9BXS6 441 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ACPTQ9BZG2 426 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 SIL1Q9H173 461 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 RAD21L1Q9H4I0 556 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 XKR8Q9H6D3 395 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 C8orf4Q9NR00 106 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 TRMT13Q9NUP7 481 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ANO10Q9NW15 660 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 IL37Q9NZH6 218 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 FBXO40Q9UH90 709 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM153AQ9UHL3 310 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM50BQ9Y247 325 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 NUDCQ9Y266 331 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 CRYL1Q9Y2S2 319 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 TSC22D4Q9Y3Q8 395 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 ANKRD30AQ9BXX3 1397 aa4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 RPRD2Q5VT52 1461 aaKnown RBP4.98□□□□□ -1.61
HMGB3P9-201ENST00000441799 WDR19Q8NEZ3 1342 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CDK13Q14004 1512 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ITSN2Q9NZM3 1697 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 PLA2R1Q13018 1463 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZSCAN5CA6NGD5 496 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC85CA6NKD9 419 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 PRR5-ARHGAP8B1AHC4 643 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 B4DLN1 442 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 H0YIV9 168 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 H3BQV1 296 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GCOM1H8Y6P7 765 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAGEB3O15480 346 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GUCY1B2O75343 617 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NPTXRO95502 500 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 MYZAPP0CAP1 466 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms