RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SLC6A11P48066 632 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 RARSP54136 660 aaKnown RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ITGA1P56199 1179 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 HERVK_113P62684 666 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ATP8B2P98198 1209 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 EXOSC9Q06265 439 aaKnown RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 COX10Q12887 443 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 SHROOM1Q2M3G4 852 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 TRIM71Q2Q1W2 868 aaKnown RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 BTBD16Q32M84 506 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 C2orf76Q3KRA6 126 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ERMARDQ5T6L9 678 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GARNL3Q5VVW2 1013 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 RAP1GAP2Q684P5 730 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 CYP20A1Q6UW02 462 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 KIAA0408Q6ZU52 694 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GAREM2Q75VX8 874 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 LRRC8DQ7L1W4 858 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 FAM126BQ8IXS8 530 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 USP38Q8NB14 1042 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GAB3Q8WWW8 586 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 SEPT1Q8WYJ6 367 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 CHFRQ96EP1 664 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 BICD1Q96G01 975 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 C16orf45Q96MC5 204 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 DACH2Q96NX9 599 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GBP4Q96PP9 640 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ATP6V0BQ99437 205 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 CITED2Q99967 270 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 SYT3Q9BQG1 590 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 NOL10Q9BSC4 688 aaKnown RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 FUZQ9BT04 418 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 C1QTNF3Q9BXJ4 246 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 TNMDQ9H2S6 317 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 MRPL46Q9H2W6 279 aaKnown RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 MMADHCQ9H3L0 296 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 THAP9Q9H5L6 903 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 OPA3Q9H6K4 179 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 SLC6A20Q9NP91 592 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 RIC8BQ9NVN3 520 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 HCFC1R1Q9NWW0 138 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ZDHHC7Q9NXF8 308 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 AKAP7Q9P0M2 348 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 DNAJB9Q9UBS3 223 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 UBA2Q9UBT2 640 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ST6GALNAC2Q9UJ37 374 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ZMYND8Q9ULU4 1186 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 TELO2Q9Y4R8 837 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 CCL27Q9Y4X3 112 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.33□□□□□ -1.563e-6■■■■□ 21.7
GABPB1-204ENST00000396464 RUSC2Q8N2Y8 1516 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 KLK10O43240 276 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 LAMTOR5O43504 91 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 KCNQ3O43525 872 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 KINO60870 393 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CSPG5O95196 566 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 GGPS1O95749 300 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 GLP2RO95838 553 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TMIGD3P0DMS9 266 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TXNP10599 105 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 UBL4AP11441 157 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CYP2A6P11509 494 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SFTPCP11686 197 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ALADP13716 330 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 LAG3P18627 525 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 KLRC1P26715 233 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 IL1R2P27930 398 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 PRDX5P30044 214 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 GDF5P43026 501 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SLC6A9P48067 706 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TKTL1P51854 596 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ALDH18A1P54886 795 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SLC12A3P55017 1021 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SLC6A3Q01959 620 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 LASP1Q14847 261 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 RAB39AQ14964 217 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ZNF805Q5CZA5 627 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TTC22Q5TAA0 569 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SLFN12LQ6IEE8 588 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 TRAT1Q6PIZ9 186 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 RAB11FIP2Q7L804 512 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 LIMS2Q7Z4I7 341 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 LURAP1LQ8IV03 231 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SCN4BQ8IWT1 228 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 RBM12BQ8IXT5 1001 aaKnown RBP5.32□□□□□ -1.56
GABPB1-204ENST00000396464 KIAA2013Q8IYS2 634 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 WDTC1Q8N5D0 677 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 SLC16A11Q8NCK7 471 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ZBTB44Q8NCP5 570 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 ARRDC4Q8NCT1 418 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 OR56A3Q8NH54 315 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 NFKBIDQ8NI38 313 aa5.32□□□□□ -1.56
GABPB1-204ENST00000396464 FBXO30Q8TB52 745 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms