RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SH2B3Q9UQQ2 575 aa5.97□□□□□ -1.45
SYNE2-210ENST00000553455 LRRFIP2Q9Y608 721 aaKnown RBP5.97□□□□□ -1.45
SYNE2-210ENST00000553455 GXYLT2A0PJZ3 443 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 HMX3A6NHT5 357 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 SPRY2O43597 315 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 ITPKBP27987 946 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 ZEB1P37275 1124 aaPredicted RBP5.96□□□□□ -1.46
SYNE2-210ENST00000553455 CUL4BQ13620 913 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 AASDHQ4L235 1098 aaPredicted RBP5.96□□□□□ -1.46
SYNE2-210ENST00000553455 FBXO47Q5MNV8 452 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 ATPAF1Q5TC12 328 aaPredicted RBP5.96□□□□□ -1.46
SYNE2-210ENST00000553455 FAM90A2PQ658T7 463 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 GRHL2Q6ISB3 625 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 HERC6Q8IVU3 1022 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 CLASRPQ8N2M8 674 aaKnown RBP5.96□□□□□ -1.46
SYNE2-210ENST00000553455 RUBCNQ92622 972 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 MCRS1Q96EZ8 462 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 FBXL20Q96IG2 436 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 ZSCAN31Q96LW9 406 aaPredicted RBP5.96□□□□□ -1.46
SYNE2-210ENST00000553455 PRR25Q96S07 402 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 VPS16Q9H269 839 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 EHD3Q9NZN3 535 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 CNTN6Q9UQ52 1028 aa5.96□□□□□ -1.46
SYNE2-210ENST00000553455 A8MVJ9 347 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 H0Y3Z8 333 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 KIAA0355O15063 1070 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 MPPED1O15442 326 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 PEX1O43933 1283 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 PPP6R2O75170 966 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 CER1O95813 267 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 CKMT1AP12532 417 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 JUPP14923 745 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 CD19P15391 556 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 CTGFP29279 349 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 GKP32189 559 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 MCM5P33992 734 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 FOLR3P41439 243 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 EIF4A1P60842 406 aaKnown RBP5.95□□□□□ -1.46
SYNE2-210ENST00000553455 CSHL1Q14406 222 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 LY6G5CQ5SRR4 150 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 NFRKBQ6P4R8 1299 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 RRAGAQ7L523 313 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 RAB11FIP2Q7L804 512 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 SPRED1Q7Z699 444 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 FTSJ3Q8IY81 847 aaKnown RBP5.95□□□□□ -1.46
SYNE2-210ENST00000553455 SIMC1Q8NDZ2 872 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 SH3RF3Q8TEJ3 882 aaPredicted RBP5.95□□□□□ -1.46
SYNE2-210ENST00000553455 WDR60Q8WVS4 1066 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 XAGE5Q8WWM1 108 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 TFAP2BQ92481 460 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 PAAF1Q9BRP4 392 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 TWSG1Q9GZX9 223 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 NKX1-2Q9UD57 310 aaPredicted RBP5.95□□□□□ -1.46
SYNE2-210ENST00000553455 LZTS1Q9Y250 596 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 MAST3O60307 1309 aa5.95□□□□□ -1.46
SYNE2-210ENST00000553455 KIF28PB7ZC32 967 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 M0QZQ0 153 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 CTIFO43310 598 aaKnown RBP5.94□□□□□ -1.46
SYNE2-210ENST00000553455 SH3BP5O60239 455 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 PMPCBO75439 489 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 NXPH3O95157 252 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 ONECUT2O95948 504 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 AGR2O95994 175 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 TMEM225BP0DP42 221 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 ZFXP17010 805 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-210ENST00000553455 DRD1P21728 446 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 SEC24CP53992 1094 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 KCNJ12Q14500 433 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 ST3GAL2Q16842 350 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 NBPF8Q3BBV2 869 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 Q6ZNX1 250 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 TRABD2AQ86V40 505 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 IL17REQ8NFR9 667 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 PNISRQ8TF01 805 aaKnown RBP5.94□□□□□ -1.46
SYNE2-210ENST00000553455 TBATAQ96M53 351 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 TRAPPC9Q96Q05 1148 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 MAF1Q9H063 256 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 SYBUQ9NX95 663 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 PDP2Q9P2J9 529 aa5.94□□□□□ -1.46
SYNE2-210ENST00000553455 C19orf53Q9UNZ5 99 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-210ENST00000553455 REXO2Q9Y3B8 237 aaKnown RBP5.94□□□□□ -1.46
SYNE2-210ENST00000553455 LOC105369274A0A096LPK9 316 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 LOC102723532A0A0G2JNH3 316 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 RRN3P2A6NIE6 340 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 PSMD9O00233 223 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TJP3O95049 919 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TK1P04183 234 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 PRKCBP05771 671 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 PYGLP06737 847 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TGM1P22735 817 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 BLOC1S1P78537 153 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 E2F1Q01094 437 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 DEUP1Q05D60 604 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 BMPR2Q13873 1038 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 EFR3AQ14156 821 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 FAM110CQ1W6H9 321 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 LSM12Q3MHD2 195 aaKnown RBP5.93□□□□□ -1.46
SYNE2-210ENST00000553455 ADCK5Q3MIX3 580 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 CCDC144NLQ6NUI1 221 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms