RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 TMEM35BQ8NCS4 154 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 SLC35B2Q8TB61 432 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 ECSITQ9BQ95 431 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 EBF3Q9H4W6 596 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 RAB6BQ9NRW1 208 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 K7ERI5 159 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 MCF2LO15068 1137 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 UGT1A9O60656 530 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 ASPHQ12797 758 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 RAPH1Q70E73 1250 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 TAS1R3Q7RTX0 852 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 JOSD2Q8TAC2 188 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 MZB1Q8WU39 189 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 TRAPPC9Q96Q05 1148 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
HDAC7-230ENST00000552960 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 UGT1A7Q9HAW7 530 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 UGT1A10Q9HAW8 530 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 UGT1A8Q9HAW9 530 aa12.84□□□□□ -0.35
HDAC7-230ENST00000552960 LOC100653049A0A140TA62 436 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 KRT34O76011 436 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 SORBS2O94875 1100 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 LYPLA2O95372 231 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 KRT3P12035 628 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 SFNP31947 248 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 OSTNP61366 133 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 DPYSL3Q14195 570 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CDO1Q16878 200 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CNPY1Q3B7I2 92 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 TBC1D25Q3MII6 688 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 DRICH1Q6PGQ1 229 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CRLF3Q8IUI8 442 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 A8MXQ7 604 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 FARP2O94887 1054 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PSAPP07602 524 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 GARTP22102 1010 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CDC16Q13042 620 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PIGHQ14442 188 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 MMP19Q99542 508 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 TIPINQ9BVW5 301 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CYP26B1Q9NR63 512 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 ARHGEF4Q9NR80 690 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 STRIP2Q9ULQ0 834 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 HEY1Q9Y5J3 304 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 CXorf49A8MYA2 514 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 BTBD19C9JJ37 291 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 RNASEH1O60930 286 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 EDN1P05305 212 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 GJB1P08034 283 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 SUPT20HL2P0C7V6 817 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 ETV4P43268 484 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PSMC1P62191 440 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PEX6Q13608 980 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PSMD6Q15008 389 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 SPDYAQ5MJ70 313 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 NDUFAF2Q8N183 169 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 TRAPPC12Q8WVT3 735 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 NMD3Q96D46 503 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 WWP1Q9H0M0 922 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 SSU72Q9NP77 194 aaKnown RBP12.83□□□□□ -0.36
HDAC7-230ENST00000552960 PACSIN3Q9UKS6 424 aa12.83□□□□□ -0.36
HDAC7-230ENST00000552960 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 MCM3APO60318 1980 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 PDHXO00330 501 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 KRT37O76014 449 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 APRTP07741 180 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 SCNN1BP51168 640 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 PTPN18Q99952 460 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 MMADHCQ9H3L0 296 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 TAGLN3Q9UI15 199 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms