RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ARHGAP15Q53QZ3 475 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 ARL6IP4Q66PJ3 421 aaKnown RBP5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 RAP1GAP2Q684P5 730 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 PGBD2Q6P3X8 592 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 KIAA0408Q6ZU52 694 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 RD3Q7Z3Z2 195 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZNF527Q8NB42 609 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 CYP2W1Q8TAV3 490 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZNF384Q8TF68 577 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 SARAFQ96BY9 339 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 EIF3CQ99613 913 aaKnown RBP5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 STK33Q9BYT3 514 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 CIPCQ9C0C6 399 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 SLITRK6Q9H5Y7 841 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 NECTIN3Q9NQS3 549 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 C11orf21Q9P2W6 132 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 TAGLN3Q9UI15 199 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 VPS51Q9UID3 782 aa5.72□□□□□ -1.49
HMGB1P38-201ENST00000490557 ABHD14A-ACY1A0A1B0GW23 586 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 FFAR2O15552 330 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 FGAP02671 866 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 PECAM1P16284 738 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 CHAF1AQ13111 956 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 RAB30Q15771 203 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 ZNF362Q5T0B9 420 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 ABLIM2Q6H8Q1 611 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 FBXO42Q6P3S6 717 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 GGT6Q6P531 493 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 SERPINA13PQ6UXR4 307 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 TRIM72Q6ZMU5 477 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 ADGRG3Q86Y34 549 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 RASGRP3Q8IV61 690 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 SFTPA1Q8IWL2 248 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 METTL25Q8N6Q8 603 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 LENG8Q96PV6 779 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 ALG13Q9NP73 1137 aaKnown RBP5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 LPAR3Q9UBY5 353 aa5.71□□□□□ -1.5
HMGB1P38-201ENST00000490557 POLR2AP24928 1970 aaKnown RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 SPRY2O43597 315 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 WDR47O94967 919 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 IGLV2-14P01704 120 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ARP10275 920 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 FPR3P25089 353 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ADRA1DP25100 572 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ITPKBP27987 946 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 DGKQP52824 942 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 CYP4F2P78329 520 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 TXNL4AP83876 142 aaKnown RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ATP1A4Q13733 1029 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 SMN1Q16637 294 aaKnown RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 KIRREL2Q6UWL6 708 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ENAHQ8N8S7 591 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 TERB1Q8NA31 727 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 IPO4Q8TEX9 1081 aaKnown RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 HS6ST2Q96MM7 605 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 BBC3Q96PG8 261 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 MMS19Q96T76 1030 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 CRB3Q9BUF7 120 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 TTLL2Q9BWV7 592 aa5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 WDR12Q9GZL7 423 aaKnown RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 ARPP21Q9UBL0 812 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P38-201ENST00000490557 COL15A1P39059 1388 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 TARM1B6A8C7 271 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 SMIM22K7EJ46 135 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 SKAP2O75563 359 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 GCATO75600 419 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 DRD1P21728 446 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 GSTM5P46439 218 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 COPB1P53618 953 aaKnown RBP5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 ICA1Q05084 483 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 GATAD2AQ86YP4 633 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 SUN3Q8TAQ9 357 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 POF1BQ8WVV4 589 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 LTV1Q96GA3 475 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 WDYHV1Q96HA8 205 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 PRPF18Q99633 342 aaKnown RBP5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 GDF15Q99988 308 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 MACROD1Q9BQ69 325 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 CINPQ9BW66 212 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 USP29Q9HBJ7 922 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 HELLSQ9NRZ9 838 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 CA14Q9ULX7 337 aa5.69□□□□□ -1.5
HMGB1P38-201ENST00000490557 A0A087WV62 115 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 GOLGA6L3A6NEY3 463 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 PIP5K1BO14986 540 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 PROP1O75360 226 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 GLP2RO95838 553 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 LDHAP00338 332 aaKnown RBP5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 C1RP00736 705 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 DIO1P49895 249 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 PSG6Q00889 435 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 LMAN2Q12907 356 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 BFSP2Q13515 415 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 ELF2Q15723 593 aa5.68□□□□□ -1.5
HMGB1P38-201ENST00000490557 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms