RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ANO4Q32M45 955 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 RHBDF2Q6PJF5 856 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PASD1Q8IV76 773 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 FAM162AQ96A26 154 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TJP2Q9UDY2 1190 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 RREB1Q92766 1687 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 LINC00854A0A1B0GVQ3 168 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PIPSLA2A3N6 862 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 B2RBV5 119 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 EPB42P16452 691 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 GTF2H1P32780 548 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 SLC16A2P36021 539 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 COILP38432 576 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 HSPA13P48723 471 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 ATP12AP54707 1039 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 GRM2Q14416 872 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 SLC30A5Q8TAD4 765 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 MRPL48Q96GC5 212 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 SH3GLB2Q9NR46 395 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 ZNF804BA4D1E1 1349 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 USP1O94782 785 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 ALOX15P16050 662 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 JAK3P52333 1124 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 TAP1Q03518 808 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 KBTBD12Q3ZCT8 623 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 FAM102AQ5T9C2 384 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 MFSD4BQ5TF39 518 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 EPB41L1Q9H4G0 881 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 TDRKHQ9Y2W6 561 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 CASZ1Q86V15 1759 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 CENPXA8MT69 81 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 BTBD19C9JJ37 291 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 FYNP06241 537 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PIM1P11309 404 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 AKT1P31749 480 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 JAM2P57087 298 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 GSTM4Q03013 218 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 COASYQ13057 564 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 SYTL3Q4VX76 610 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 RTL3Q8N8U3 475 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 CASP10Q92851 521 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 DGCR14Q96DF8 476 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 ATXN7L3BQ96GX2 97 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 SPRTNQ9H040 489 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
U2AF1-209ENST00000475639 DOLKQ9UPQ8 538 aa11.88□□□□□ -0.51
U2AF1-209ENST00000475639 A8MXQ7 604 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 PSMD3O43242 534 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 PGM3O95394 542 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CYBBP04839 570 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 TMEM253P0C7T8 217 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 DPP10Q8N608 796 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 TRIM43BA6NCK2 446 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 M0QYV0 167 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NR3C1P04150 777 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 MLNP12872 115 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 ARSEP51690 589 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 USP10Q14694 798 aaKnown RBP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 DGKHQ86XP1 1220 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 PGBD4Q96DM1 585 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 QKIQ96PU8 341 aaKnown RBP eCLIP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NUP85Q9BW27 656 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 ALG6Q9Y672 507 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 TRIM24O15164 1050 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 SYNCRIPO60506 623 aaKnown RBP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 PIK3R1P27986 724 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 KCNK10P57789 538 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 ST8SIA6P61647 398 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 STX5Q13190 355 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 HNRNPDQ14103 355 aaKnown RBP11.87□□□□□ -0.51
U2AF1-209ENST00000475639 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
U2AF1-209ENST00000475639 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms