RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SOX8P57073 446 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 NKX3-2P78367 333 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ACTN3Q08043 901 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 DCTN2Q13561 401 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 SEC23BQ15437 767 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MAN2A1Q16706 1144 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 CEP68Q76N32 757 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 KANSL1Q7Z3B3 1105 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PPP1R42Q7Z4L9 355 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PLEKHH3Q7Z736 793 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 Q8N1Y9 231 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 DCBLD1Q8N8Z6 715 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ZBTB8BQ8NAP8 495 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 GPR150Q8NGU9 434 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 METTL6Q8TCB7 284 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 CPT1CQ8TCG5 803 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 BICD2Q8TD16 824 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 SLC22A17Q8WUG5 538 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 DEPDC1BQ8WUY9 529 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 HSPH1Q92598 858 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 DVL3Q92997 716 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 KTI12Q96EK9 354 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PPP1R13BQ96KQ4 1090 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ANKRD2Q9GZV1 360 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ZCWPW1Q9H0M4 648 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 CHST8Q9H2A9 424 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 TP63Q9H3D4 680 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 EPB41L1Q9H4G0 881 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 LIN28AQ9H9Z2 209 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 RBM12Q9NTZ6 932 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MCM9Q9NXL9 1143 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 TAB2Q9NYJ8 693 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ANAPC5Q9UJX4 755 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 AJAP1Q9UKB5 411 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 USP18Q9UMW8 372 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 COA3Q9Y2R0 106 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 DERAQ9Y315 318 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MYPNQ86TC9 1320 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 KRT87PA6NCN2 255 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 A8MV72 311 aaPredicted RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PSMA7O14818 248 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PCDH17O14917 1159 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 MATN3O15232 486 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 SGSM2O43147 1006 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 DNPH1O43598 174 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 KERAO60938 352 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 SEC22BO75396 215 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 METTL18O95568 372 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PRLP01236 227 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 CCDC159P0C7I6 412 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PTPN1P18031 435 aaKnown RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 HSPA4P34932 840 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PGM1P36871 562 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PAFAH1B1P43034 410 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 RPP30P78346 268 aaKnown RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TLE1Q04724 770 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TMED1Q13445 227 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 NAA25Q14CX7 972 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 MAPKAPK3Q16644 382 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TCP11X2Q5H9J9 407 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 DEPDC1Q5TB30 811 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 MROH9Q5TGP6 573 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 KCTD1Q719H9 257 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 GLRX5Q86SX6 157 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 MIB1Q86YT6 1006 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TXNDC5Q8NBS9 432 aaKnown RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 ASB15Q8WXK1 588 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 ZNF653Q96CK0 615 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PGAP3Q96FM1 320 aaPredicted RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 AK8Q96MA6 479 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PCDHAC1Q9H158 963 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 WDCPQ9H6R7 721 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 L2HGDHQ9H9P8 463 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 COPS7BQ9H9Q2 264 aaPredicted RBP5.34□□□□□ -1.55
GABPB1-204ENST00000396464 TAS2R10Q9NYW0 307 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 PLA2G3Q9NZ20 509 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 LAMP5Q9UJQ1 280 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 DAPP1Q9UN19 280 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 MED16Q9Y2X0 877 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 LYVE1Q9Y5Y7 322 aa5.34□□□□□ -1.55
GABPB1-204ENST00000396464 A0A1W2PQ09 198 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 E7EVH7 732 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 STX16-NPEPL1H3BU86 382 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 BOLA2-SMG1P6H3BVE0 249 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 PYCARD-AS1I3L0S3 204 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 STX16O14662 325 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 MUSKO15146 869 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ZBTB14O43829 449 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 PPFIA2O75334 1257 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 CYP7B1O75881 506 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 ABHD16AO95870 558 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 PECAM1P16284 738 aaPredicted RBP5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GRK5P34947 590 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GJA4P35212 333 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GP5P40197 560 aa5.33□□□□□ -1.56
GABPB1-204ENST00000396464 GARSP41250 739 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms