RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 USTQ9Y2C2 406 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 GOLGA6BA6NDN3 693 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 DPYSL4O14531 572 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 ZBED1O96006 694 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 HAPLN1P10915 354 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 GPD1P21695 349 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 DNAJB2P25686 324 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 IL1R2P27930 398 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 USP46P62068 366 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 PITX1P78337 314 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 SMARCB1Q12824 385 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 DUSP4Q13115 394 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 EFHC1Q5JVL4 640 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 OTUD1Q5VV17 481 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 ALS2CLQ60I27 953 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 SIX6OS1Q8N1H7 587 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 SCML4Q8N228 414 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 MMGT1Q8N4V1 131 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 SPPL2BQ8TCT7 592 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 GPR152Q8TDT2 470 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 MYCBPQ99417 103 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 C17orf80Q9BSJ5 609 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 MTIF3Q9H2K0 278 aaKnown RBP15.36■□□□□ 0.05
CXCL12-201ENST00000343575 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 GBF1Q92538 1859 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 CHD9Q3L8U1 2897 aa15.36■□□□□ 0.05
CXCL12-201ENST00000343575 FBXO21O94952 628 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 SEC24AO95486 1093 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 PYGMP11217 842 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 DNAJB1P25685 340 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 SLC25A11Q02978 314 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 SYPL2Q5VXT5 272 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 B4GALNT4Q76KP1 1039 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 BNIPLQ7Z465 357 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 DEFB106AQ8N104 65 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 CENPIQ92674 756 aaPredicted RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 NT5C3BQ969T7 300 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 SLC2A13Q96QE2 648 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 DDX23Q9BUQ8 820 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ALG13Q9NP73 1137 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ASNSD1Q9NWL6 643 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 IL37Q9NZH6 218 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 GREB1Q4ZG55 1949 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 CES2O00748 559 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 URODP06132 367 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 CTSAP10619 480 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ATF6P18850 670 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 PTPN9P43378 593 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ERVFC1P60507 584 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 KRT17Q04695 432 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ZNF211Q13398 564 aaPredicted RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 RAB33AQ14088 237 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 GPR65Q8IYL9 337 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 RASGEF1CQ8N431 466 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 C2orf15Q8WU43 125 aaKnown RBP15.35■□□□□ 0.05
CXCL12-201ENST00000343575 PEBP4Q96S96 227 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 GDF15Q99988 308 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 CARD9Q9H257 536 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 RXFP1Q9HBX9 757 aa15.35■□□□□ 0.05
CXCL12-201ENST00000343575 TEX28O15482 410 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 HSF2BPO75031 334 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 GLI1P08151 1106 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 ATF2P15336 505 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 GGCXP38435 758 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 MATKP42679 507 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 IRAK1P51617 712 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 ATXN1P54253 815 aaKnown RBP15.34■□□□□ 0.05
CXCL12-201ENST00000343575 HDAC4P56524 1084 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 ATP11AP98196 1134 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 NNTQ13423 1086 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 CAMK1Q14012 370 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 ACAP1Q15027 740 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 SCD5Q86SK9 330 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 SPPL3Q8TCT6 385 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 PBKQ96KB5 322 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 TACO1Q9BSH4 297 aaKnown RBP15.34■□□□□ 0.05
CXCL12-201ENST00000343575 CAPS2Q9BXY5 557 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 MRPL17Q9NRX2 175 aaKnown RBP15.34■□□□□ 0.05
CXCL12-201ENST00000343575 FNIP2Q9P278 1114 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
CXCL12-201ENST00000343575 NAALADL1Q9UQQ1 740 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
CXCL12-201ENST00000343575 FAM92AA1XBS5 289 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 C5orf67F2Z3F1 127 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 PSTPIP1O43586 416 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 DAB1O75553 588 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 CNPP09543 421 aaKnown RBP15.33■□□□□ 0.05
CXCL12-201ENST00000343575 TNFRSF8P28908 595 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 MIPP30301 263 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms