RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 SCARA3Q6AZY7 606 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 MPZL3Q6UWV2 235 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 APBB1IPQ7Z5R6 666 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 NEK8Q86SG6 692 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 SCN4BQ8IWT1 228 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 SRRM1Q8IYB3 904 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CACTIN-AS1Q8N1I8 211 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 THEM5Q8N1Q8 247 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 C2orf15Q8WU43 125 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 RFFLQ8WZ73 363 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 BIRC7Q96CA5 298 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 MTMR9Q96QG7 549 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 PYM1Q9BRP8 204 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 NUP58Q9BVL2 599 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 RNF26Q9BY78 433 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 OSBPL2Q9H1P3 480 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CAAP1Q9H8G2 361 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 SH3GLB2Q9NR46 395 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 GTF3C4Q9UKN8 822 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 UBQLN1Q9UMX0 589 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 STON1Q9Y6Q2 735 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CENPEQ02224 2701 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ARID1BQ8NFD5 2236 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CCDC196A0A1B0GTZ2 297 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 PIRO00625 290 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 WNT7AO00755 349 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 SLC9A3R1O14745 358 aaPredicted RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 ABL1P00519 1130 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 CKMT2P17540 419 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 TXKP42681 527 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 NPTX2P47972 431 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 GRIA4P48058 902 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 LSSP48449 732 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 PEX3P56589 373 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 ERVPABLB-1P60509 514 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 SLC7A9P82251 487 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 CLN3Q13286 438 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 TEAD4Q15561 434 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 C9orf57Q5W0N0 161 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 SIPA1Q96FS4 1042 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 P2RY11Q96G91 374 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 IFT74Q96LB3 600 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 ELF4Q99607 663 aaPredicted RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 MRPL4Q9BYD3 311 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 RPF1Q9H9Y2 349 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 POLR1BQ9H9Y6 1135 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 DNAJC17Q9NVM6 304 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 UXTQ9UBK9 157 aaPredicted RBP8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 PLAAQ9Y263 795 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 CITO14578 2027 aa8.51□□□□□ -1.05
PPP4R1-211ENST00000578875 ZNF840PA6NDX5 716 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 FSBPO95073 299 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 BAG4O95429 457 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 CISD3P0C7P0 127 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 RNF224P0DH78 156 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 IFNAR1P17181 557 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 CYP3A5P20815 502 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 ABCB4P21439 1286 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 OXTRP30559 389 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 CYP4F2P78329 520 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 SKOR1P84550 965 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 CLCA4Q14CN2 919 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 PPP2R5AQ15172 486 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 INAVAQ3KP66 663 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 SPATA1Q5VX52 437 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 BTBD8Q5XKL5 378 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 GRAMD4Q6IC98 578 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 METTL23Q86XA0 190 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 BBS7Q8IWZ6 715 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 LSMEM2Q8N112 164 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 FSIP1Q8NA03 581 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 BRF1Q92994 677 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 EBF2Q9HAK2 575 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 SPHK2Q9NRA0 654 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 ADAMTS1Q9UHI8 967 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
PPP4R1-211ENST00000578875 ARHGEF35A5YM69 484 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 TRIM38O00635 465 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 HOXC11O43248 304 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 TSPAN3O60637 253 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 ATP2C2O75185 946 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 GCFC2P16383 781 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 ELAVL4P26378 380 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 COPAP53621 1224 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 SMARCB1Q12824 385 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 PDIA5Q14554 519 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 NCAPHQ15003 741 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 TGIF1Q15583 401 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 ENOX2Q16206 610 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 ECM1Q16610 540 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 TBR1Q16650 682 aa8.49□□□□□ -1.05
PPP4R1-211ENST00000578875 CDCP2Q5VXM1 449 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms