RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZNF214Q9UL59 606 aaPredicted RBP5.63□□□□□ -1.51
VAPA-203ENST00000577539 LTBP3Q9NS15 1303 aa5.63□□□□□ -1.51
VAPA-203ENST00000577539 SLC35F4A4IF30 521 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 C5orf60A6NFR6 353 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 F8VP50 259 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 NOP56O00567 594 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 GH1P01241 217 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 NEFHP12036 1026 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 MAGEA4P43358 317 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 STAT5BP51692 787 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 MYL6P60660 151 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SEPT6Q14141 434 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 MPP2Q14168 576 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CCNG2Q16589 344 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SMTNL2Q2TAL5 461 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SCARA3Q6AZY7 606 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 GPAT2Q6NUI2 795 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 TRIM72Q6ZMU5 477 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 MON1BQ7L1V2 547 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 ERICH1Q86X53 443 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 RNF149Q8NC42 400 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 TMEM35BQ8NCS4 154 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 BBOF1Q8ND07 529 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SERPINB12Q96P63 405 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 ZNF317Q96PQ6 595 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 TGS1Q96RS0 853 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 IP6K2Q9UHH9 426 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 PGAP2Q9UHJ9 254 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 GGA2Q9UJY4 613 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 DNPEPQ9ULA0 475 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 NAALADL1Q9UQQ1 740 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 STK38LQ9Y2H1 464 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 A0A096LPE4 126 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 A0A1W2PPZ6 126 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 ATP2A1O14983 1001 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CHUKO15111 745 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CDH16O75309 829 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 PIAS1O75925 651 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 TJP3O95049 919 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CST3P01034 146 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 F11P03951 625 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 EDN3P14138 238 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 KCNA3P22001 575 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 NAMPTP43490 491 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CAV1Q03135 178 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 TMEM95Q3KNT9 176 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 RPS26P11Q5JNZ5 115 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 SYDE1Q6ZW31 735 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CYP4X1Q8N118 509 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 C4orf33Q8N1A6 199 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 C12orf50Q8NA57 414 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 PRPF31Q8WWY3 499 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 CCT6BQ92526 530 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CGRRF1Q99675 332 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 PORCNQ9H237 461 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 HOXC10Q9NYD6 342 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SAE1Q9UBE0 346 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 NEU2Q9Y3R4 380 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 ATXN2Q99700 1313 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 A0A1W2PQH9 124 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 PSTPIP1O43586 416 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 UBOX5O94941 541 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 STBD1O95210 358 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 PSMA2P25787 234 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 KCNT1Q5JUK3 1230 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 CRELD2Q6UXH1 353 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 GADL1Q6ZQY3 521 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 RAB44Q7Z6P3 723 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 ZBTB8OSQ8IWT0 167 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 SUGP1Q8IWZ8 645 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 ZBED8Q8IZ13 594 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 KIF2BQ8N4N8 673 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 GLIS1Q8NBF1 620 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 RBM41Q96IZ5 413 aaKnown RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 HAPLN2Q9GZV7 340 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 KLHL14Q9P2G3 628 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 KCNH4Q9UQ05 1017 aa5.62□□□□□ -1.51
VAPA-203ENST00000577539 USP15Q9Y4E8 981 aaPredicted RBP5.62□□□□□ -1.51
VAPA-203ENST00000577539 ASAP2O43150 1006 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 TSPAN6O43657 245 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 STAM2O75886 525 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 PDIA2Q13087 525 aaKnown RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 CAPSQ13938 189 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 MAPK6Q16659 721 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZNF699Q32M78 642 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 FAM182AQ5T1J6 154 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 FOXB2Q5VYV0 432 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 DLK2Q6UY11 383 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ARHGEF18Q6ZSZ5 1173 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 RHPN2Q8IUC4 686 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 EXD1Q8NHP7 514 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 KLHL29Q96CT2 875 aa5.61□□□□□ -1.51
VAPA-203ENST00000577539 ZBED3Q96IU2 234 aaPredicted RBP5.61□□□□□ -1.51
VAPA-203ENST00000577539 CFAP57Q96MR6 1250 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms