RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 PIGZQ86VD9 579 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 ECHDC2Q86YB7 292 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 ZCCHC9Q8N567 271 aaKnown RBP11.22□□□□□ -0.61
CPEB4-203ENST00000517880 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.22□□□□□ -0.61
CPEB4-203ENST00000517880 RSAD2Q8WXG1 361 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 P3H4Q92791 437 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 CFAP57Q96MR6 1250 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 CCDC77Q9BR77 488 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 MED10Q9BTT4 135 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 LRRC4Q9HBW1 653 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 NGRNQ9NPE2 291 aaKnown RBP11.22□□□□□ -0.61
CPEB4-203ENST00000517880 PRDM10Q9NQV6 1147 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 RGS18Q9NS28 235 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPEB4-203ENST00000517880 TMEM51Q9NW97 253 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 RRN3Q9NYV6 651 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 RCOR3Q9P2K3 495 aaPredicted RBP11.22□□□□□ -0.61
CPEB4-203ENST00000517880 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
CPEB4-203ENST00000517880 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 SGK1O00141 431 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 PIK3R2O00459 728 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 TP73O15350 636 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 FKTNO75072 461 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 DAB1O75553 588 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 TCEA3O75764 348 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 GRAP2O75791 330 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 TTC4O95801 387 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 CKBP12277 381 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 NR1D1P20393 614 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 ATP5DP30049 168 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 NR2C2P49116 596 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 AIF1P55008 147 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 EIF3EP60228 445 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 YWHAZP63104 245 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 FAM189BP81408 668 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 MRPS5P82675 430 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 ATP11AP98196 1134 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 CAP1Q01518 475 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 NOMO1Q15155 1222 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 TRIP13Q15645 432 aaPredicted RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 P3H1Q32P28 736 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 PAQR9Q6ZVX9 377 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 BZW1Q7L1Q6 419 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 SIX6OS1Q8N1H7 587 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 THEM5Q8N1Q8 247 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 SCML4Q8N228 414 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 LPPQ93052 612 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.61
CPEB4-203ENST00000517880 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 TTC25Q96NG3 672 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 PCDH18Q9HCL0 1135 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 STAP1Q9ULZ2 295 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 SHOC2Q9UQ13 582 aa11.21□□□□□ -0.61
CPEB4-203ENST00000517880 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
CPEB4-203ENST00000517880 MEIS3P2A8K0S8 358 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 M0QZQ0 153 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 APOL1O14791 398 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 EIF3HO15372 352 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPEB4-203ENST00000517880 MGEA5O60502 916 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 ATP2C2O75185 946 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 AGTP01019 485 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 TYMPP19971 482 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 ACTN2P35609 894 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 HDAC4P56524 1084 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 GPS1Q13098 491 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 CBLBQ13191 982 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 XRCC4Q13426 336 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 TAF5Q15542 800 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 DPYSL2Q16555 572 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 CDO1Q16878 200 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 ANKRD20A8PQ5CZ79 823 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 MDH1BQ5I0G3 518 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SLC9A4Q6AI14 798 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 OR2W6PQ8NHA6 318 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 NT5C3BQ969T7 300 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 TLCD1Q96CP7 247 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SMARCD1Q96GM5 515 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 PIWIL1Q96J94 861 aaKnown RBP11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
CPEB4-203ENST00000517880 SLC9A7Q96T83 725 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms