RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TBC1D3BA6NDS4 549 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 SGK1O00141 431 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TM4SF5O14894 197 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 KLF8O95600 359 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-210ENST00000469897 CAVIN2O95810 425 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TRIM49P0CI25 452 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TRIM49CP0CI26 452 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 IRF1P10914 325 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 EIF2DP41214 584 aaKnown RBP14.05□□□□□ -0.16
CPSF4-210ENST00000469897 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TNFRSF4P43489 277 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 KIR2DL1P43626 348 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-210ENST00000469897 ASPAP45381 313 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 LIMK1P53667 647 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 KRT85P78386 507 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 KDSRQ06136 332 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 PPP3CAQ08209 521 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 DPYDQ12882 1025 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 MDGA1Q8NFP4 955 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TAS1R2Q8TE23 839 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 JAKMIP2Q96AA8 810 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 TWNKQ96RR1 684 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 MMRN2Q9H8L6 949 aa14.05□□□□□ -0.16
CPSF4-210ENST00000469897 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-210ENST00000469897 NUP210Q8TEM1 1887 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-210ENST00000469897 BCLAF3A2AJT9 711 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 TRIM24O15164 1050 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 TLR5O60602 858 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 RHOBTB3O94955 611 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 KIF20AO95235 890 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 BCKDHBP21953 392 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 NR2F2P24468 414 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 TUBP50607 506 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 ADAM9Q13443 819 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 ANO4Q32M45 955 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 KRBA2Q6ZNG9 492 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 GPRIN1Q7Z2K8 1008 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 FRMD1Q8N878 549 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 RLN3Q8WXF3 142 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 DDX1Q92499 740 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 CCDC47Q96A33 483 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 OTUB2Q96DC9 234 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 CNOT6LQ96LI5 555 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 HNRNPABQ99729 332 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 KLF16Q9BXK1 252 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 FBXO44Q9H4M3 255 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 APOBEC3GQ9HC16 384 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 TLR8Q9NR97 1041 aaKnown RBP14.04□□□□□ -0.16
CPSF4-210ENST00000469897 SPHK2Q9NRA0 654 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 OSER1Q9NX31 292 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 DEC1Q9P2X7 70 aa14.04□□□□□ -0.16
CPSF4-210ENST00000469897 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 HHLA1C9JL84 531 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 MAPK13O15264 365 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 GREM1O60565 184 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 TULP3O75386 442 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 ALDH1A2O94788 518 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 FAM200BP0CF97 657 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 KRT13P13646 458 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 CD58P19256 250 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 ACO1P21399 889 aaKnown RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 ATP5C1P36542 298 aaKnown RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 EOGTQ5NDL2 527 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 N4BP2L1Q5TBK1 243 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 RNF43Q68DV7 783 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 CLEC20AQ6ZU45 233 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 HTR3DQ70Z44 454 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 INTS8Q75QN2 995 aaKnown RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 FAM186BQ8IYM0 893 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 PGBD3Q8N328 593 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 WHAMMQ8TF30 809 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 EEF2KMTQ96G04 330 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 NT5C1AQ9BXI3 368 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 POLMQ9NP87 494 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-210ENST00000469897 NUDT5Q9UKK9 219 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 SCML2Q9UQR0 700 aa14.03□□□□□ -0.16
CPSF4-210ENST00000469897 HOXC11O43248 304 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 MAP3K13O43283 966 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 ADAM23O75077 832 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 ZNF202O95125 648 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 RPL13P26373 211 aaKnown RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 PSMC2P35998 433 aaKnown RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 WASP42768 502 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 DHPSP49366 369 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 NFIL3Q16649 462 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 HSF5Q4G112 596 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 ZNF394Q53GI3 561 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 PMS2CLQ68D20 193 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 C11orf74Q86VG3 221 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 ETFBKMTQ8IXQ9 262 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 GUF1Q8N442 669 aaKnown RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms