RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.29
HERC3-203ENST00000407637 AQP9O43315 295 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 FAM13AO94988 1023 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ATF7P17544 494 aaPredicted RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 PEX3P56589 373 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 FRMD7Q6ZUT3 714 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 PALM2Q8IXS6 379 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CATSPER1Q8NEC5 780 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 TBC1D15Q8TC07 691 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 TFB1MQ8WVM0 346 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 IFT122Q9HBG6 1241 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CDC14AQ9UNH5 594 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 IKBKGQ9Y6K9 419 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 NAV1Q8NEY1 1877 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 GNPATO15228 680 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
HERC3-203ENST00000407637 SIN3BO75182 1162 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CYP11B1P15538 503 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 BBS9Q3SYG4 887 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ACAD10Q6JQN1 1059 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 MIER3Q7Z3K6 550 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 RSPH3Q86UC2 560 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 NUDCD3Q8IVD9 361 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 ADCY4Q8NFM4 1077 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 SREK1Q8WXA9 508 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 TMEM121Q9BTD3 319 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 NCKIPSDQ9NZQ3 722 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 TMA7Q9Y2S6 64 aaKnown RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 FAM47E-STBD1D6RA91 191 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SGK1O00141 431 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 MCF2LO15068 1137 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 PPP1R11O60927 126 aaPredicted RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 SULT1C4O75897 302 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 FAM155BO75949 473 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ATE1O95260 518 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 H6PDO95479 791 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 STARD3NLO95772 234 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 INHBAP08476 426 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 CCDC130P13994 396 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 KLRK1P26718 216 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 HSPA13P48723 471 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 STAT2P52630 851 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 NFIL3Q16649 462 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 NRF1Q16656 503 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 GPR141Q7Z602 305 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ELMO3Q96BJ8 720 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 FAM84BQ96KN1 310 aaPredicted RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 WRNIP1Q96S55 665 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 PKP2Q99959 881 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
HERC3-203ENST00000407637 DMAC2Q9NW81 257 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SIRPGQ9P1W8 387 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 SORCS3Q9UPU3 1222 aa13.26□□□□□ -0.29
HERC3-203ENST00000407637 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 CD247P20963 164 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 EYA3Q99504 573 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 MMP19Q99542 508 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 OSBPL10Q9BXB5 764 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SLC13A1Q9BZW2 595 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SIAEQ9HAT2 523 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SACM1LQ9NTJ5 587 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SCHIP1Q9P0W5 487 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 VPS51Q9UID3 782 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 TRIM49D1C9J1S8 452 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 KDM1AO60341 852 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 SNNO75324 88 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 KLHL2O95198 593 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 RPL10P27635 214 aaKnown RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 RPA1P27694 616 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 EPHA3P29320 983 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 CDK18Q07002 472 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 NR1D2Q14995 579 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 ATP13A4Q4VNC1 1196 aa13.25□□□□□ -0.29
HERC3-203ENST00000407637 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
HERC3-203ENST00000407637 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms