RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PIK3CAP42336 1068 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ZNF131P52739 623 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MS4A2Q01362 244 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MSLNQ13421 630 aaPredicted RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 TMEM179Q6ZVK1 233 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 LDB1Q86U70 411 aaPredicted RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 SYTL5Q8TDW5 730 aaPredicted RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 SHC3Q92529 594 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 C18orf25Q96B23 403 aaPredicted RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 ZNF653Q96CK0 615 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 CUEDC2Q9H467 287 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 EMCNQ9ULC0 261 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 GOLGA6L6A8MZA4 724 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 NCAM1P13591 858 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ETV4P43268 484 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ADCY7P51828 1080 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 RTP1P59025 263 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MYL6P60660 151 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 HTRA4P83105 476 aaPredicted RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 SEMG2Q02383 582 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 BRD3Q15059 726 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TRIM60Q495X7 471 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 HYIQ5T013 277 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MMS22LQ6ZRQ5 1243 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 RASGEF1CQ8N431 466 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TRIML1Q8N9V2 468 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 XPO6Q96QU8 1125 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 PHOX2BQ99453 314 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ERP44Q9BS26 406 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 UBN1Q9NPG3 1134 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 A1CFQ9NQ94 594 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 SLAMF8Q9P0V8 285 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 DLGAP1O14490 977 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TYROBPO43914 113 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MSCO60682 206 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 FAM107AO95990 144 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 GNAO1P09471 354 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TLR1Q15399 786 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 NUGGCQ68CJ6 796 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 LAIR1Q6GTX8 287 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 DENND1BQ6P3S1 775 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 CCDC137Q6PK04 289 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 RPUSD2Q8IZ73 545 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 TTC9BQ8N6N2 239 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TANKQ92844 425 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ESAMQ96AP7 390 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TBC1D10AQ9BXI6 508 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 FTHL17Q9BXU8 183 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 MTMR12Q9C0I1 747 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 CAB39LQ9H9S4 337 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 KIAA1586Q9HCI6 787 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 GTSE1Q9NYZ3 720 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 A0A0B4J269 797 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 UPK3BL1B0FP48 263 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 UPK3BL2E5RIL1 263 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 PRAMEF12O95522 483 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 EEF1GP26641 437 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 CTNNA1P35221 906 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 RBM5P52756 815 aaKnown RBP eCLIP5.92□□□□□ -1.46
CD47-201ENST00000355354 ITGA8P53708 1063 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ICA1Q05084 483 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 SLC20A2Q08357 652 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 TUBB3Q13509 450 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 CCDC40Q4G0X9 1142 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 ZC3H18Q86VM9 953 aaKnown RBP5.92□□□□□ -1.46
CD47-201ENST00000355354 OR52K2Q8NGK3 314 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 OR10Q1Q8NGQ4 319 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 GRK7Q8WTQ7 553 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 PBX4Q9BYU1 374 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 NINJ2Q9NZG7 142 aa5.92□□□□□ -1.46
CD47-201ENST00000355354 DNAJA2O60884 412 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 PDE5AO76074 875 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ALAS1P13196 640 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 TKTP29401 623 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 CLCN3P51790 818 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 TTLL12Q14166 644 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 FIGNQ5HY92 759 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CAND1Q86VP6 1230 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 SCUBE3Q8IX30 993 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ANKRD35Q8N283 1001 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 MYCT1Q8N699 235 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 DAGLBQ8NCG7 672 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 HIPK4Q8NE63 616 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ANKRD27Q96NW4 1050 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CADM1Q9BY67 442 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 NAT10Q9H0A0 1025 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 FBRSL1Q9HCM7 1045 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 ARMCX3Q9UH62 379 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 LRRTM2O43300 516 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SREBF1P36956 1147 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SCNN1BP51168 640 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 PTENP60484 403 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ZXDCQ2QGD7 858 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 LPCAT4Q643R3 524 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SMYD5Q6GMV2 418 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 APBB1IPQ7Z5R6 666 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 CNPY4Q8N129 248 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms